RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 EPCAMP16422 314 aa25.41■■□□□ 1.66
CCDC61-207ENST00000599044 HOXB8P17481 243 aaPredicted RBP25.41■■□□□ 1.66
CCDC61-207ENST00000599044 RBM25P49756 843 aaKnown RBP25.41■■□□□ 1.66
CCDC61-207ENST00000599044 PCBP1Q15365 356 aaKnown RBP eCLIP25.41■■□□□ 1.66
CCDC61-207ENST00000599044 ECM1Q16610 540 aa25.41■■□□□ 1.66
CCDC61-207ENST00000599044 HFE2Q6ZVN8 426 aa25.41■■□□□ 1.66
CCDC61-207ENST00000599044 APOL6Q9BWW8 343 aa25.41■■□□□ 1.66
CCDC61-207ENST00000599044 NFKBIZQ9BYH8 718 aa25.41■■□□□ 1.66
CCDC61-207ENST00000599044 BACH2Q9BYV9 841 aa25.41■■□□□ 1.66
CCDC61-207ENST00000599044 SH2B1Q9NRF2 756 aaPredicted RBP25.41■■□□□ 1.66
CCDC61-207ENST00000599044 DBR1Q9UK59 544 aaKnown RBP25.41■■□□□ 1.66
CCDC61-207ENST00000599044 IRAK3Q9Y616 596 aa25.41■■□□□ 1.66
CCDC61-207ENST00000599044 SSBP05455 408 aaKnown RBP eCLIP25.4■■□□□ 1.66
CCDC61-207ENST00000599044 WEE2P0C1S8 567 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 SP100P23497 879 aaPredicted RBP25.4■■□□□ 1.66
CCDC61-207ENST00000599044 MLH1P40692 756 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 TOB1P50616 345 aaPredicted RBP25.4■■□□□ 1.66
CCDC61-207ENST00000599044 HMGN5P82970 282 aaKnown RBP25.4■■□□□ 1.66
CCDC61-207ENST00000599044 PTPN14Q15678 1187 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 FAM184AQ8NB25 1140 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 CNNM3Q8NE01 707 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 SLC22A17Q8WUG5 538 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 BSNDQ8WZ55 320 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 EDAQ92838 391 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 FAM193BQ96PV7 902 aaPredicted RBP25.4■■□□□ 1.66
CCDC61-207ENST00000599044 NACC1Q96RE7 527 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 TMEM175Q9BSA9 504 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 NXF3Q9H4D5 531 aaKnown RBP25.4■■□□□ 1.66
CCDC61-207ENST00000599044 POLD4Q9HCU8 107 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 MARCH5Q9NX47 278 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 KANSL3Q9P2N6 904 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 FAN1Q9Y2M0 1017 aa25.4■■□□□ 1.66
CCDC61-207ENST00000599044 ZDBF2Q9HCK1 2354 aa25.39■■□□□ 1.66
CCDC61-207ENST00000599044 TTLL13PA6NNM8 815 aa25.39■■□□□ 1.66
CCDC61-207ENST00000599044 F8W810 466 aa25.39■■□□□ 1.66
CCDC61-207ENST00000599044 INPPL1O15357 1258 aa25.39■■□□□ 1.66
CCDC61-207ENST00000599044 AKAP5P24588 427 aa25.39■■□□□ 1.66
CCDC61-207ENST00000599044 RPA1P27694 616 aa25.39■■□□□ 1.66
CCDC61-207ENST00000599044 SCNN1GP51170 649 aa25.39■■□□□ 1.66
CCDC61-207ENST00000599044 TAS1R1Q7RTX1 841 aa25.39■■□□□ 1.66
CCDC61-207ENST00000599044 COLGALT2Q8IYK4 626 aa25.39■■□□□ 1.66
CCDC61-207ENST00000599044 CCDC51Q96ER9 411 aa25.39■■□□□ 1.66
CCDC61-207ENST00000599044 ADAM7Q9H2U9 754 aa25.39■■□□□ 1.66
CCDC61-207ENST00000599044 UBN1Q9NPG3 1134 aa25.39■■□□□ 1.66
CCDC61-207ENST00000599044 PRG3Q9Y2Y8 225 aaPredicted RBP25.39■■□□□ 1.66
CCDC61-207ENST00000599044 LRRIQ4A6NIV6 560 aa25.38■■□□□ 1.65
CCDC61-207ENST00000599044 LILRB3O75022 631 aa25.38■■□□□ 1.65
CCDC61-207ENST00000599044 NPTXRO95502 500 aa25.38■■□□□ 1.65
CCDC61-207ENST00000599044 NCBP1Q09161 790 aaKnown RBP25.38■■□□□ 1.65
CCDC61-207ENST00000599044 BMS1Q14692 1282 aaKnown RBP25.38■■□□□ 1.65
CCDC61-207ENST00000599044 GSTCDQ8NEC7 633 aa25.38■■□□□ 1.65
CCDC61-207ENST00000599044 POMKQ9H5K3 350 aa25.38■■□□□ 1.65
CCDC61-207ENST00000599044 USP20Q9Y2K6 914 aa25.38■■□□□ 1.65
CCDC61-207ENST00000599044 A0A1B0GUA9 196 aa25.37■■□□□ 1.65
CCDC61-207ENST00000599044 U2AF2P26368 475 aaKnown RBP eCLIP25.37■■□□□ 1.65
CCDC61-207ENST00000599044 DSC1Q08554 894 aa25.37■■□□□ 1.65
CCDC61-207ENST00000599044 ORC2Q13416 577 aaPredicted RBP25.37■■□□□ 1.65
CCDC61-207ENST00000599044 GNL2Q13823 731 aaKnown RBP25.37■■□□□ 1.65
CCDC61-207ENST00000599044 TPRNQ4KMQ1 711 aa25.37■■□□□ 1.65
CCDC61-207ENST00000599044 RARS2Q5T160 578 aaKnown RBP25.37■■□□□ 1.65
CCDC61-207ENST00000599044 PADI6Q6TGC4 694 aa25.37■■□□□ 1.65
CCDC61-207ENST00000599044 KLHL5Q96PQ7 755 aa25.37■■□□□ 1.65
CCDC61-207ENST00000599044 CARNS1A5YM72 827 aa25.36■■□□□ 1.65
CCDC61-207ENST00000599044 EFEMP2O95967 443 aa25.36■■□□□ 1.65
CCDC61-207ENST00000599044 CNPP09543 421 aaKnown RBP25.36■■□□□ 1.65
CCDC61-207ENST00000599044 OR1G1P47890 313 aa25.36■■□□□ 1.65
CCDC61-207ENST00000599044 ZXDAP98168 799 aa25.36■■□□□ 1.65
CCDC61-207ENST00000599044 GIT2Q14161 759 aa25.36■■□□□ 1.65
CCDC61-207ENST00000599044 CDCA2Q69YH5 1023 aaPredicted RBP25.36■■□□□ 1.65
CCDC61-207ENST00000599044 SLC27A1Q6PCB7 646 aa25.36■■□□□ 1.65
CCDC61-207ENST00000599044 MCPH1Q8NEM0 835 aa25.36■■□□□ 1.65
CCDC61-207ENST00000599044 ERMNQ8TAM6 284 aa25.36■■□□□ 1.65
CCDC61-207ENST00000599044 TRIM6Q9C030 488 aaPredicted RBP25.36■■□□□ 1.65
CCDC61-207ENST00000599044 FZD8Q9H461 694 aa25.36■■□□□ 1.65
CCDC61-207ENST00000599044 KLK14Q9P0G3 267 aa25.36■■□□□ 1.65
CCDC61-207ENST00000599044 PCDHB6Q9Y5E3 794 aa25.36■■□□□ 1.65
CCDC61-207ENST00000599044 EDN1P05305 212 aa25.35■■□□□ 1.65
CCDC61-207ENST00000599044 CYP11B2P19099 503 aa25.35■■□□□ 1.65
CCDC61-207ENST00000599044 TRAPPC10P48553 1259 aa25.35■■□□□ 1.65
CCDC61-207ENST00000599044 FXR2P51116 673 aaKnown RBP eCLIP25.35■■□□□ 1.65
CCDC61-207ENST00000599044 TMEM87AQ8NBN3 555 aa25.35■■□□□ 1.65
CCDC61-207ENST00000599044 RABGGTAQ92696 567 aa25.35■■□□□ 1.65
CCDC61-207ENST00000599044 TSHZ2Q9NRE2 1034 aa25.35■■□□□ 1.65
CCDC61-207ENST00000599044 GIT1Q9Y2X7 761 aa25.35■■□□□ 1.65
CCDC61-207ENST00000599044 KMT2EQ8IZD2 1858 aa25.34■■□□□ 1.65
CCDC61-207ENST00000599044 ARHGEF35A5YM69 484 aa25.34■■□□□ 1.65
CCDC61-207ENST00000599044 C2CD2LO14523 706 aa25.34■■□□□ 1.65
CCDC61-207ENST00000599044 CD2BP2O95400 341 aaKnown RBP25.34■■□□□ 1.65
CCDC61-207ENST00000599044 CCT6AP40227 531 aaKnown RBP25.34■■□□□ 1.65
CCDC61-207ENST00000599044 ITIH3Q06033 890 aa25.34■■□□□ 1.65
CCDC61-207ENST00000599044 IL17AQ16552 155 aa25.34■■□□□ 1.65
CCDC61-207ENST00000599044 CES5AQ6NT32 575 aa25.34■■□□□ 1.65
CCDC61-207ENST00000599044 PPP4R3CPQ6ZMV5 832 aa25.34■■□□□ 1.65
CCDC61-207ENST00000599044 TRIM67Q6ZTA4 783 aa25.34■■□□□ 1.65
CCDC61-207ENST00000599044 CXCL16Q9H2A7 254 aa25.34■■□□□ 1.65
CCDC61-207ENST00000599044 CACNG4Q9UBN1 327 aa25.34■■□□□ 1.65
CCDC61-207ENST00000599044 LRWD1Q9UFC0 647 aa25.34■■□□□ 1.65
CCDC61-207ENST00000599044 SOD2P04179 222 aa25.33■■□□□ 1.65
CCDC61-207ENST00000599044 CLCN4P51793 760 aa25.33■■□□□ 1.65
CCDC61-207ENST00000599044 PTGDRQ13258 359 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms