RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 N4BP3O15049 544 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 ITGB1P05556 798 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 LAG3P18627 525 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 CTNNB1P35222 781 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 UBE3AQ05086 875 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 PAN2Q504Q3 1202 aaKnown RBP19.43■□□□□ 0.7
USHBP1-209ENST00000598570 NOMO2Q5JPE7 1267 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 FOXD4L5Q5VV16 416 aaPredicted RBP19.43■□□□□ 0.7
USHBP1-209ENST00000598570 GLB1LQ6UWU2 654 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 KLHL23Q8NBE8 558 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 COLGALT1Q8NBJ5 622 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 HELQQ8TDG4 1101 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 FOXD4L4Q8WXT5 416 aaPredicted RBP19.43■□□□□ 0.7
USHBP1-209ENST00000598570 LPPQ93052 612 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 ACO2Q99798 780 aaKnown RBP19.43■□□□□ 0.7
USHBP1-209ENST00000598570 KIFC3Q9BVG8 833 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 STRA6Q9BX79 667 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 KMT5AQ9NQR1 393 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 AAASQ9NRG9 546 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 KBTBD4Q9NVX7 518 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 LARSQ9P2J5 1176 aaKnown RBP19.43■□□□□ 0.7
USHBP1-209ENST00000598570 KANSL3Q9P2N6 904 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 MTUS1Q9ULD2 1270 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 GIT1Q9Y2X7 761 aa19.43■□□□□ 0.7
USHBP1-209ENST00000598570 BRWD1Q9NSI6 2320 aa19.42■□□□□ 0.7
USHBP1-209ENST00000598570 FAM237AA0A1B0GTK4 181 aa19.42■□□□□ 0.7
USHBP1-209ENST00000598570 FRMD3A2A2Y4 597 aa19.42■□□□□ 0.7
USHBP1-209ENST00000598570 GRM6O15303 877 aa19.42■□□□□ 0.7
USHBP1-209ENST00000598570 GTPBP6O43824 516 aaPredicted RBP19.42■□□□□ 0.7
USHBP1-209ENST00000598570 EFEMP2O95967 443 aa19.42■□□□□ 0.7
USHBP1-209ENST00000598570 DNAJB1P25685 340 aa19.42■□□□□ 0.7
USHBP1-209ENST00000598570 TXLNAP40222 546 aa19.42■□□□□ 0.7
USHBP1-209ENST00000598570 AFF1P51825 1210 aaKnown RBP19.42■□□□□ 0.7
USHBP1-209ENST00000598570 RESP18Q5W5W9 173 aa19.42■□□□□ 0.7
USHBP1-209ENST00000598570 CUEDC2Q9H467 287 aa19.42■□□□□ 0.7
USHBP1-209ENST00000598570 TBC1D13Q9NVG8 400 aa19.42■□□□□ 0.7
USHBP1-209ENST00000598570 HCSTQ9UBK5 93 aa19.42■□□□□ 0.7
USHBP1-209ENST00000598570 PCDHB12Q9Y5F1 795 aa19.42■□□□□ 0.7
USHBP1-209ENST00000598570 MYMKA6NI61 221 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 H0YCG3 227 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 PIGRP01833 764 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 SSBP05455 408 aaKnown RBP eCLIP19.41■□□□□ 0.7
USHBP1-209ENST00000598570 ITGA4P13612 1032 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 IGFBP4P22692 258 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 SMTNP53814 917 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 DSC1Q08554 894 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 PTPROQ16827 1216 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 XKR4Q5GH76 650 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 EEF1DP3Q658K8 133 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 KCNT2Q6UVM3 1135 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 ZPBP2Q6X784 338 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 SV2BQ7L1I2 683 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 ABI1Q8IZP0 508 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 LEO1Q8WVC0 666 aaPredicted RBP19.41■□□□□ 0.7
USHBP1-209ENST00000598570 RSAD1Q9HA92 442 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 PARVGQ9HBI0 331 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 ATP6V1DQ9Y5K8 247 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 PLXNA4Q9HCM2 1894 aa19.41■□□□□ 0.7
USHBP1-209ENST00000598570 UNC80Q8N2C7 3258 aa19.4■□□□□ 0.7
USHBP1-209ENST00000598570 ARL5CA6NH57 179 aa19.4■□□□□ 0.7
USHBP1-209ENST00000598570 CCDC169A6NNP5 214 aa19.4■□□□□ 0.7
USHBP1-209ENST00000598570 SLC16A4O15374 487 aa19.4■□□□□ 0.7
USHBP1-209ENST00000598570 ABCD1P33897 745 aa19.4■□□□□ 0.7
USHBP1-209ENST00000598570 GTF2BQ00403 316 aa19.4■□□□□ 0.7
USHBP1-209ENST00000598570 ATF7IP2Q5U623 682 aa19.4■□□□□ 0.7
USHBP1-209ENST00000598570 ADALQ6DHV7 355 aa19.4■□□□□ 0.7
USHBP1-209ENST00000598570 SLC39A11Q8N1S5 342 aa19.4■□□□□ 0.7
USHBP1-209ENST00000598570 NXF3Q9H4D5 531 aaKnown RBP19.4■□□□□ 0.7
USHBP1-209ENST00000598570 NRDE2Q9H7Z3 1164 aa19.4■□□□□ 0.7
USHBP1-209ENST00000598570 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.39■□□□□ 0.69
USHBP1-209ENST00000598570 FSCN2O14926 492 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 B4GALT3O60512 393 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 PPP1R37O75864 691 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 FGF18O76093 207 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 CMA1P23946 247 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 PPM1AP35813 382 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 NUCB2P80303 420 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 RAD51AP2Q09MP3 1159 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 DCAF4L1Q3SXM0 396 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 PDE12Q6L8Q7 609 aaKnown RBP19.39■□□□□ 0.69
USHBP1-209ENST00000598570 ALKAL1Q6UXT8 129 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 HAUS6Q7Z4H7 955 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 ZNF280BQ86YH2 543 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 RNF169Q8NCN4 708 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 SLC17A8Q8NDX2 589 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 DDX12PQ92771 950 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 TMEM175Q9BSA9 504 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 MRPL4Q9BYD3 311 aaKnown RBP19.39■□□□□ 0.69
USHBP1-209ENST00000598570 MIOSQ9NXC5 875 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 SEL1LQ9UBV2 794 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 USP20Q9Y2K6 914 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 HES2Q9Y543 173 aa19.39■□□□□ 0.69
USHBP1-209ENST00000598570 TRAK2O60296 914 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 DDHD2O94830 711 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 NPTXRO95502 500 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 GALTP07902 379 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 BCAR1P56945 870 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 KRT85P78386 507 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 NAB2Q15742 525 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 ZNF720Q7Z2F6 126 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms