RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 TRIM6Q9C030 488 aaPredicted RBP24.26■■□□□ 1.47
CHMP2A-204ENST00000597848 PDZD7Q9H5P4 517 aa24.26■■□□□ 1.47
CHMP2A-204ENST00000597848 TNRC18O15417 2968 aaPredicted RBP24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 C9IYK1 514 aa24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 HNRNPDLO14979 420 aaKnown RBP24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 NPTXRO95502 500 aa24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 MATR3P43243 847 aaKnown RBP eCLIP24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 SARSP49591 514 aaKnown RBP24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 DEFB103AP81534 67 aa24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 KCNA1Q09470 495 aa24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 EEF1DP3Q658K8 133 aa24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 SLC27A1Q6PCB7 646 aa24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 ZPBP2Q6X784 338 aa24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 APBB1IPQ7Z5R6 666 aaPredicted RBP24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 RNF169Q8NCN4 708 aa24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 SPATA20Q8TB22 786 aa24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 EIF2AQ9BY44 585 aaKnown RBP24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 LRFN2Q9ULH4 789 aa24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 TNFSF13BQ9Y275 285 aa24.25■■□□□ 1.47
CHMP2A-204ENST00000597848 EIF3DO15371 548 aaKnown RBP eCLIP24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 UPP2O95045 317 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 SKIP12755 728 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 RAB27AP51159 221 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 UBXN11Q5T124 520 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 ISM2Q6H9L7 571 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 EPM2AIP1Q7L775 607 aaPredicted RBP24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 ZBTB33Q86T24 672 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 NELFCDQ8IXH7 590 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 TDHQ8IZJ6 230 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 KIAA0895Q8NCT3 520 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 ZNF507Q8TCN5 953 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 SCFD1Q8WVM8 642 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 TMEM206Q9H813 350 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 FAM105AQ9NUU6 356 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 KIAA1468Q9P260 1216 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 ANKFY1Q9P2R3 1169 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 MAN1B1Q9UKM7 699 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 GDAQ9Y2T3 454 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 PCDHB7Q9Y5E2 793 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 PCDHB2Q9Y5E7 798 aa24.24■■□□□ 1.47
CHMP2A-204ENST00000597848 A0A0U1RQF3 1178 aa24.23■■□□□ 1.47
CHMP2A-204ENST00000597848 BIN1O00499 593 aa24.23■■□□□ 1.47
CHMP2A-204ENST00000597848 TOM1L1O75674 476 aa24.23■■□□□ 1.47
CHMP2A-204ENST00000597848 FAM189BP81408 668 aa24.23■■□□□ 1.47
CHMP2A-204ENST00000597848 RASIP1Q5U651 963 aa24.23■■□□□ 1.47
CHMP2A-204ENST00000597848 FAM117BQ6P1L5 589 aa24.23■■□□□ 1.47
CHMP2A-204ENST00000597848 ECHDC2Q86YB7 292 aa24.23■■□□□ 1.47
CHMP2A-204ENST00000597848 ZBTB45Q96K62 511 aaPredicted RBP24.23■■□□□ 1.47
CHMP2A-204ENST00000597848 TRAIPQ9BWF2 469 aa24.23■■□□□ 1.47
CHMP2A-204ENST00000597848 RNF216Q9NWF9 866 aaPredicted RBP24.23■■□□□ 1.47
CHMP2A-204ENST00000597848 PIGRP01833 764 aa24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 STAG3L1P0CL83 205 aa24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 HARSP12081 509 aaKnown RBP24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 ATP2A2P16615 1042 aaKnown RBP24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 DCAF4L1Q3SXM0 396 aa24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 ZNF568Q3ZCX4 644 aa24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 MPZL3Q6UWV2 235 aa24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 TMCO2Q7Z6W1 182 aaPredicted RBP24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 PHOSPHO2Q8TCD6 241 aa24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 SLC9A7Q96T83 725 aa24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 GTPBP4Q9BZE4 634 aaKnown RBP24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 IKZF4Q9H2S9 585 aa24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 PRO3102Q9H379 93 aa24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 MAPK8IP1Q9UQF2 711 aa24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 COLQQ9Y215 455 aaPredicted RBP24.22■■□□□ 1.47
CHMP2A-204ENST00000597848 UBE4BO95155 1302 aa24.21■■□□□ 1.47
CHMP2A-204ENST00000597848 ANKRD63C9JTQ0 380 aa24.21■■□□□ 1.47
CHMP2A-204ENST00000597848 CLDN3O15551 220 aa24.21■■□□□ 1.47
CHMP2A-204ENST00000597848 KIF20AO95235 890 aa24.21■■□□□ 1.47
CHMP2A-204ENST00000597848 ZNF658Q5TYW1 1059 aaPredicted RBP24.21■■□□□ 1.47
CHMP2A-204ENST00000597848 NPAS4Q8IUM7 802 aa24.21■■□□□ 1.47
CHMP2A-204ENST00000597848 SMYD4Q8IYR2 804 aaPredicted RBP24.21■■□□□ 1.47
CHMP2A-204ENST00000597848 TOP1MTQ969P6 601 aa24.21■■□□□ 1.47
CHMP2A-204ENST00000597848 PGBD4Q96DM1 585 aa24.21■■□□□ 1.47
CHMP2A-204ENST00000597848 ZBED2Q9BTP6 218 aa24.21■■□□□ 1.47
CHMP2A-204ENST00000597848 APOL6Q9BWW8 343 aa24.21■■□□□ 1.47
CHMP2A-204ENST00000597848 PTPRHQ9HD43 1115 aa24.21■■□□□ 1.47
CHMP2A-204ENST00000597848 IPPQ9Y573 584 aa24.21■■□□□ 1.47
CHMP2A-204ENST00000597848 TISP43B9A030 160 aa24.2■■□□□ 1.46
CHMP2A-204ENST00000597848 ZNF623O75123 536 aa24.2■■□□□ 1.46
CHMP2A-204ENST00000597848 EOMESO95936 686 aa24.2■■□□□ 1.46
CHMP2A-204ENST00000597848 HOXD13P35453 343 aa24.2■■□□□ 1.46
CHMP2A-204ENST00000597848 BMT2Q1RMZ1 405 aa24.2■■□□□ 1.46
CHMP2A-204ENST00000597848 CCDC183Q5T5S1 534 aa24.2■■□□□ 1.46
CHMP2A-204ENST00000597848 SLFN12LQ6IEE8 588 aa24.2■■□□□ 1.46
CHMP2A-204ENST00000597848 HACE1Q8IYU2 909 aa24.2■■□□□ 1.46
CHMP2A-204ENST00000597848 CDT1Q9H211 546 aa24.2■■□□□ 1.46
CHMP2A-204ENST00000597848 ELAC1Q9H777 363 aaKnown RBP24.2■■□□□ 1.46
CHMP2A-204ENST00000597848 TMEM161AQ9NX61 479 aa24.2■■□□□ 1.46
CHMP2A-204ENST00000597848 HES2Q9Y543 173 aa24.2■■□□□ 1.46
CHMP2A-204ENST00000597848 MCF2P10911 925 aa24.19■■□□□ 1.46
CHMP2A-204ENST00000597848 ITGA4P13612 1032 aa24.19■■□□□ 1.46
CHMP2A-204ENST00000597848 PROZP22891 400 aa24.19■■□□□ 1.46
CHMP2A-204ENST00000597848 NOLC1Q14978 699 aaKnown RBP eCLIP24.19■■□□□ 1.46
CHMP2A-204ENST00000597848 NFKBIBQ15653 356 aa24.19■■□□□ 1.46
CHMP2A-204ENST00000597848 KNOP1Q1ED39 458 aaKnown RBP24.19■■□□□ 1.46
CHMP2A-204ENST00000597848 CAVIN1Q6NZI2 390 aaKnown RBP24.19■■□□□ 1.46
CHMP2A-204ENST00000597848 SLC39A4Q6P5W5 647 aa24.19■■□□□ 1.46
CHMP2A-204ENST00000597848 MRPL10Q7Z7H8 261 aaKnown RBP24.19■■□□□ 1.46
CHMP2A-204ENST00000597848 HERC6Q8IVU3 1022 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms