RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 FAM186BQ8IYM0 893 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 ZSWIM2Q8NEG5 633 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 NLRP7Q8WX94 980 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 WNT8BQ93098 351 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 BICD1Q96G01 975 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 ZBTB45Q96K62 511 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 PRIMPOLQ96LW4 560 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 PPP1R16BQ96T49 567 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 SEZ6LQ9BYH1 1024 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 INO80BQ9C086 356 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 VPS16Q9H269 839 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 PCIF1Q9H4Z3 704 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 CDHR5Q9HBB8 845 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 METTL14Q9HCE5 456 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 PTPRHQ9HD43 1115 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 A0A0B4J269 797 aa16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 N4BP3O15049 544 aa16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 RPLP2P05387 115 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 DARSP14868 501 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 MNX1P50219 401 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 CRYBB1P53674 252 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 PPP2R3AQ06190 1150 aa16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 PTK7Q13308 1070 aa16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 TRIM71Q2Q1W2 868 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 CEP135Q66GS9 1140 aa16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 VSTM4Q8IW00 320 aa16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 NOC4LQ9BVI4 516 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 GCOM2Q9BZD3 368 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 ARMCX3Q9UH62 379 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 TNFSF13BQ9Y275 285 aa16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 FRMD4BQ9Y2L6 1034 aa16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 CNTNAP2Q9UHC6 1331 aa16.1■□□□□ 0.17
SHKBP1-211ENST00000595945 ARVCFO00192 962 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 B4GALT5O43286 388 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 TOM1L1O75674 476 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 TPM3P06753 285 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 ADRB2P07550 413 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 CDK7P50613 346 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 MRPS6P82932 125 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 MCL1Q07820 350 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 MGAT3Q09327 533 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 TMEM62Q0P6H9 643 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 PRPF4BQ13523 1007 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 PCBP1Q15365 356 aaKnown RBP eCLIP16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 PTGISQ16647 500 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 VWA3BQ502W6 1294 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 CREBRFQ8IUR6 639 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 GPD1LQ8N335 351 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 POMGNT1Q8WZA1 660 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 DHX38Q92620 1227 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 VTI1AQ96AJ9 217 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 CELF4Q9BZC1 486 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 NDST4Q9H3R1 872 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 STARD7Q9NQZ5 370 aa16.09■□□□□ 0.17
SHKBP1-211ENST00000595945 PDCD11Q14690 1871 aaKnown RBP16.08■□□□□ 0.17
SHKBP1-211ENST00000595945 RALGAPA2Q2PPJ7 1873 aa16.08■□□□□ 0.17
SHKBP1-211ENST00000595945 A0A1W2PQC6 194 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 EXTL3O43909 919 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 FAM189A1O60320 539 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 TSPAN1O60635 241 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 CSDE1O75534 798 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 SGPL1O95470 568 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 MYCP01106 439 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 TPM2P07951 284 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 PRKCSHP14314 528 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 ENPEPQ07075 957 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 SNX17Q15036 470 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 ATF7IP2Q5U623 682 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 EEF1DP3Q658K8 133 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 MPZL3Q6UWV2 235 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 RSPH3Q86UC2 560 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 CBWD2Q8IUF1 395 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 PLEKHO2Q8TD55 490 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 SLC35C1Q96A29 364 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 SAAL1Q96ER3 474 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 MFSD14AQ96MC6 490 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 SCLT1Q96NL6 688 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 OSMRQ99650 979 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 KIAA1586Q9HCI6 787 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 TRMT13Q9NUP7 481 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 TRPV2Q9Y5S1 764 aa16.08■□□□□ 0.16
SHKBP1-211ENST00000595945 GOLGA8IPA6NC78 632 aa16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 GOLGA8JA6NMD2 632 aa16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 LDHAP00338 332 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 ARF4P18085 180 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 EIF4BP23588 611 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 HSP90AA2PQ14568 343 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 SNRNP35Q16560 246 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 FAM26DQ5JW98 314 aa16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 C1orf220Q5T0J3 134 aa16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 CRELD2Q6UXH1 353 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 INTS8Q75QN2 995 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 U2AF1L4Q8WU68 220 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 TMEM40Q8WWA1 233 aa16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 ERGIC2Q96RQ1 377 aa16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 MSTO1Q9BUK6 570 aa16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 PDZD7Q9H5P4 517 aa16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 AGO2Q9UKV8 859 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.07■□□□□ 0.16
SHKBP1-211ENST00000595945 ITIH6Q6UXX5 1313 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms