RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 PGBD4Q96DM1 585 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 ZFP42Q96MM3 310 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 NOTCH4Q99466 2003 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 MTRQ99707 1265 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 HSD17B14Q9BPX1 270 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 EIF2AK1Q9BQI3 630 aaKnown RBP11.9□□□□□ -0.5
USE1-203ENST00000593597 JPH2Q9BR39 696 aaPredicted RBP11.9□□□□□ -0.5
USE1-203ENST00000593597 TMEM175Q9BSA9 504 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 HERC2P3Q9BVR0 1158 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 SLKQ9H2G2 1235 aaPredicted RBP11.9□□□□□ -0.5
USE1-203ENST00000593597 NXF3Q9H4D5 531 aaKnown RBP11.9□□□□□ -0.5
USE1-203ENST00000593597 ORC3Q9UBD5 711 aaPredicted RBP11.9□□□□□ -0.5
USE1-203ENST00000593597 CACNG4Q9UBN1 327 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 LIMD1Q9UGP4 676 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 PRG3Q9Y2Y8 225 aaPredicted RBP11.9□□□□□ -0.5
USE1-203ENST00000593597 PPME1Q9Y570 386 aa11.9□□□□□ -0.5
USE1-203ENST00000593597 CNTNAP2Q9UHC6 1331 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 TTLL13PA6NNM8 815 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 H0Y858 1186 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 JAK2O60674 1132 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 LYPLA2O95372 231 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 SOD2P04179 222 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 ARF4P18085 180 aaPredicted RBP11.89□□□□□ -0.51
USE1-203ENST00000593597 GLRA2P23416 452 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 ARL2P36404 184 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 SCNN1GP51170 649 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 CABP7Q86V35 215 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 CDR2LQ86X02 465 aaPredicted RBP11.89□□□□□ -0.51
USE1-203ENST00000593597 NSUN7Q8NE18 718 aaKnown RBP11.89□□□□□ -0.51
USE1-203ENST00000593597 URGCPQ8TCY9 931 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 B3GALT6Q96L58 329 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 GAD1Q99259 594 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 CXCL16Q9H2A7 254 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 ZSWIM4Q9H7M6 989 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 SFXN1Q9H9B4 322 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 DBR1Q9UK59 544 aaKnown RBP11.89□□□□□ -0.51
USE1-203ENST00000593597 DMXL1Q9Y485 3027 aa11.89□□□□□ -0.51
USE1-203ENST00000593597 RIF1Q5UIP0 2472 aaKnown RBP11.88□□□□□ -0.51
USE1-203ENST00000593597 ARL5CA6NH57 179 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 BTBD18B2RXH4 712 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 C2CD2LO14523 706 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 TEX28O15482 410 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 GALR2O43603 387 aaPredicted RBP11.88□□□□□ -0.51
USE1-203ENST00000593597 GAS2O43903 313 aaKnown RBP11.88□□□□□ -0.51
USE1-203ENST00000593597 CDKL5O76039 1030 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 EDN1P05305 212 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 MYBP10242 640 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 NPR3P17342 541 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 KRT2P35908 639 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 RARRES1P49788 294 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 FOSBP53539 338 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 GIT2Q14161 759 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 KIAA0319Q5VV43 1072 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 TPH2Q8IWU9 490 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 UBALD2Q8IYN6 164 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 GTF3C6Q969F1 213 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 MTMR9Q96QG7 549 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 RPS6KC1Q96S38 1066 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 CSRNP2Q9H175 543 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 TMEM60Q9H2L4 133 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 GPRC5CQ9NQ84 441 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 MAN1C1Q9NR34 630 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 USTQ9Y2C2 406 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 FAN1Q9Y2M0 1017 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 GVINP1Q7Z2Y8 2422 aa11.88□□□□□ -0.51
USE1-203ENST00000593597 FAM186AA6NE01 2351 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 PDCD11Q14690 1871 aaKnown RBP11.87□□□□□ -0.51
USE1-203ENST00000593597 POTEMA6NI47 508 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 ASAP2O43150 1006 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 PI15O43692 258 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 NARSO43776 548 aaKnown RBP11.87□□□□□ -0.51
USE1-203ENST00000593597 DKC1O60832 514 aaKnown RBP eCLIP11.87□□□□□ -0.51
USE1-203ENST00000593597 RFPL2O75678 378 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 PAPLNO95428 1278 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 SPATA31C1P0DKV0 1188 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 ITGA4P13612 1032 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 AKAP5P24588 427 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 KLRC2P26717 231 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 OR1G1P47890 313 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 ATAT1Q5SQI0 421 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 PIGOQ8TEQ8 1089 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 TCP11Q8WWU5 503 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 RABGGTAQ92696 567 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 ZNF707Q96C28 371 aaPredicted RBP11.87□□□□□ -0.51
USE1-203ENST00000593597 PRRX2Q99811 253 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 PAAF1Q9BRP4 392 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 APOL6Q9BWW8 343 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 GPR62Q9BZJ7 368 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 RXFP1Q9HBX9 757 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 FANCMQ8IYD8 2048 aa11.87□□□□□ -0.51
USE1-203ENST00000593597 CARNS1A5YM72 827 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 INO80B-WBP1J3KQ70 363 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 ERLIN2O94905 339 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 ALDH2P05091 517 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 AXLP30530 894 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 DSG1Q02413 1049 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 POU5F1BQ06416 359 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 CALCRLQ16602 461 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 NOTUMQ6P988 496 aa11.86□□□□□ -0.51
USE1-203ENST00000593597 CCDC149Q6ZUS6 474 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms