RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 EXOC6Q8TAG9 804 aa11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 FGF14Q92915 247 aa11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 CLDN23Q96B33 292 aa11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 RIT2Q99578 217 aa11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 ZMYND12Q9H0C1 365 aa11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 IFT122Q9HBG6 1241 aa11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 UBN1Q9NPG3 1134 aa11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 FNIP2Q9P278 1114 aa11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 CDH7Q9ULB5 785 aa11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 PRG3Q9Y2Y8 225 aaPredicted RBP11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 MTF2Q9Y483 593 aaPredicted RBP11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 DOCK8Q8NF50 2099 aa11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 ZFHX4Q86UP3 3567 aa11.38□□□□□ -0.59
SMCO4P1-201ENST00000592909 SLC27A2O14975 620 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 ADAMTS3O15072 1205 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 MSH4O15457 936 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 GAS7O60861 476 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 MAFO75444 373 aaPredicted RBP11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 ZMYND10O75800 440 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 NCLP19338 710 aaKnown RBP11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 FSHRP23945 695 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 PFKPQ01813 784 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 DSC1Q08554 894 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 UBXN2BQ14CS0 331 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 PFKFB3Q16875 520 aaPredicted RBP11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 MTERF2Q49AM1 385 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 ZBTB41Q5SVQ8 909 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 UBXN11Q5T124 520 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 MTSS1LQ765P7 747 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 PALB2Q86YC2 1186 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 KSR1Q8IVT5 923 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 REXO1Q8N1G1 1221 aaKnown RBP11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 CNNM3Q8NE01 707 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 ST13P5Q8NFI4 369 aaPredicted RBP11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 RDM1Q8NG50 284 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 MBOAT7Q96N66 472 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 NELL2Q99435 816 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 FAM126AQ9BYI3 521 aaPredicted RBP11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 LTB4R2Q9NPC1 389 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 FAM217BQ9NTX9 383 aaPredicted RBP11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 SEPT9Q9UHD8 586 aaPredicted RBP11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 USP18Q9UMW8 372 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 CHD6Q8TD26 2715 aa11.37□□□□□ -0.59
SMCO4P1-201ENST00000592909 MYH9P35579 1960 aaKnown RBP11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 ZBTB43O43298 467 aa11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 EDIL3O43854 480 aa11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 HOXA11P31270 313 aaPredicted RBP11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 RPS9P46781 194 aaKnown RBP11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 OR1G1P47890 313 aa11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 NECTIN1Q15223 517 aa11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 SRGAP1Q7Z6B7 1085 aa11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 SLC5A5Q92911 643 aa11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 NLRP4Q96MN2 994 aa11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 JPH2Q9BR39 696 aaPredicted RBP11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 COLEC11Q9BWP8 271 aa11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 LSG1Q9H089 658 aaKnown RBP11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 UNC45AQ9H3U1 944 aa11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 C6orf50Q9HD87 102 aa11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 PARD6AQ9NPB6 346 aa11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 PRMT8Q9NR22 394 aaPredicted RBP11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 BRPF3Q9ULD4 1205 aa11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 FRYLO94915 3013 aa11.36□□□□□ -0.59
SMCO4P1-201ENST00000592909 USP24Q9UPU5 2620 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 TMEM150BA6NC51 233 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 SLC30A4O14863 429 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 NCAM2O15394 837 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 CHMP2AO43633 222 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 NR1I2O75469 434 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 GNA11P29992 359 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 CDC27P30260 824 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 USP11P51784 963 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 CREMQ03060 361 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 USP41Q3LFD5 358 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 LRCH2Q5VUJ6 765 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 CREB3L3Q68CJ9 461 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 B3GNT9Q6UX72 402 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 GRASPQ7Z6J2 395 aaPredicted RBP11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 SMG8Q8ND04 991 aaKnown RBP11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 NETO1Q8TDF5 533 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 CCDC12Q8WUD4 166 aaPredicted RBP11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 FGF13Q92913 245 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 CCDC136Q96JN2 1154 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 SH2D3AQ9BRG2 576 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 TEKT3Q9BXF9 490 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 GMEB2Q9UKD1 530 aa11.35□□□□□ -0.59
SMCO4P1-201ENST00000592909 ARL5CA6NH57 179 aa11.34□□□□□ -0.59
SMCO4P1-201ENST00000592909 F8W810 466 aa11.34□□□□□ -0.59
SMCO4P1-201ENST00000592909 LRP3O75074 770 aa11.34□□□□□ -0.59
SMCO4P1-201ENST00000592909 PSMD10O75832 226 aa11.34□□□□□ -0.59
SMCO4P1-201ENST00000592909 HNRNPA1P09651 372 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMCO4P1-201ENST00000592909 ITGA4P13612 1032 aa11.34□□□□□ -0.59
SMCO4P1-201ENST00000592909 CD72P21854 359 aa11.34□□□□□ -0.59
SMCO4P1-201ENST00000592909 RCAN1P53805 252 aa11.34□□□□□ -0.59
SMCO4P1-201ENST00000592909 EXOSC10Q01780 885 aaKnown RBP11.34□□□□□ -0.59
SMCO4P1-201ENST00000592909 FZD5Q13467 585 aa11.34□□□□□ -0.59
SMCO4P1-201ENST00000592909 PPM1JQ5JR12 505 aa11.34□□□□□ -0.59
SMCO4P1-201ENST00000592909 FUT10Q6P4F1 479 aa11.34□□□□□ -0.59
SMCO4P1-201ENST00000592909 MAMSTRQ6ZN01 415 aa11.34□□□□□ -0.59
SMCO4P1-201ENST00000592909 ANO5Q75V66 913 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms