RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 GLUD2P49448 558 aa16.39■□□□□ 0.21
ERCC1-211ENST00000590701 ATXN1P54253 815 aaKnown RBP16.39■□□□□ 0.21
ERCC1-211ENST00000590701 STARD6P59095 220 aa16.39■□□□□ 0.21
ERCC1-211ENST00000590701 SNW1Q13573 536 aaKnown RBP16.39■□□□□ 0.21
ERCC1-211ENST00000590701 VARS2Q5ST30 1063 aaKnown RBP16.39■□□□□ 0.21
ERCC1-211ENST00000590701 PLA2G4FQ68DD2 849 aa16.39■□□□□ 0.21
ERCC1-211ENST00000590701 ANO5Q75V66 913 aa16.39■□□□□ 0.21
ERCC1-211ENST00000590701 SMG8Q8ND04 991 aaKnown RBP16.39■□□□□ 0.21
ERCC1-211ENST00000590701 PJA1Q8NG27 643 aa16.39■□□□□ 0.21
ERCC1-211ENST00000590701 PHKBQ93100 1093 aa16.39■□□□□ 0.21
ERCC1-211ENST00000590701 RHOBTB2Q9BYZ6 727 aa16.39■□□□□ 0.21
ERCC1-211ENST00000590701 SLC2A4RGQ9NR83 387 aa16.39■□□□□ 0.21
ERCC1-211ENST00000590701 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.39■□□□□ 0.21
ERCC1-211ENST00000590701 STK39Q9UEW8 545 aa16.39■□□□□ 0.21
ERCC1-211ENST00000590701 SSX2IPQ9Y2D8 614 aa16.39■□□□□ 0.21
ERCC1-211ENST00000590701 PRPF3O43395 683 aaKnown RBP16.38■□□□□ 0.21
ERCC1-211ENST00000590701 KINO60870 393 aaKnown RBP16.38■□□□□ 0.21
ERCC1-211ENST00000590701 RPL17P18621 184 aaKnown RBP16.38■□□□□ 0.21
ERCC1-211ENST00000590701 USP11P51784 963 aa16.38■□□□□ 0.21
ERCC1-211ENST00000590701 NPEPPSP55786 919 aa16.38■□□□□ 0.21
ERCC1-211ENST00000590701 NTHL1P78549 312 aa16.38■□□□□ 0.21
ERCC1-211ENST00000590701 LILRA6Q6PI73 481 aa16.38■□□□□ 0.21
ERCC1-211ENST00000590701 PARM1Q6UWI2 310 aa16.38■□□□□ 0.21
ERCC1-211ENST00000590701 RNF168Q8IYW5 571 aaPredicted RBP16.38■□□□□ 0.21
ERCC1-211ENST00000590701 RABGGTAQ92696 567 aa16.38■□□□□ 0.21
ERCC1-211ENST00000590701 FGF14Q92915 247 aa16.38■□□□□ 0.21
ERCC1-211ENST00000590701 TMEM143Q96AN5 459 aa16.38■□□□□ 0.21
ERCC1-211ENST00000590701 GAD1Q99259 594 aa16.38■□□□□ 0.21
ERCC1-211ENST00000590701 PRKD2Q9BZL6 878 aa16.38■□□□□ 0.21
ERCC1-211ENST00000590701 SPATA6Q9NWH7 488 aaPredicted RBP16.38■□□□□ 0.21
ERCC1-211ENST00000590701 DPP7Q9UHL4 492 aa16.38■□□□□ 0.21
ERCC1-211ENST00000590701 KMT2BQ9UMN6 2715 aaPredicted RBP16.38■□□□□ 0.21
ERCC1-211ENST00000590701 ITGA4P13612 1032 aa16.37■□□□□ 0.21
ERCC1-211ENST00000590701 NCLP19338 710 aaKnown RBP16.37■□□□□ 0.21
ERCC1-211ENST00000590701 CD72P21854 359 aa16.37■□□□□ 0.21
ERCC1-211ENST00000590701 DSG1Q02413 1049 aa16.37■□□□□ 0.21
ERCC1-211ENST00000590701 CSTF1Q05048 431 aaKnown RBP16.37■□□□□ 0.21
ERCC1-211ENST00000590701 B3GNT9Q6UX72 402 aa16.37■□□□□ 0.21
ERCC1-211ENST00000590701 CCDC12Q8WUD4 166 aaPredicted RBP16.37■□□□□ 0.21
ERCC1-211ENST00000590701 PRPF31Q8WWY3 499 aaKnown RBP16.37■□□□□ 0.21
ERCC1-211ENST00000590701 EIF2AQ9BY44 585 aaKnown RBP16.37■□□□□ 0.21
ERCC1-211ENST00000590701 GPR62Q9BZJ7 368 aa16.37■□□□□ 0.21
ERCC1-211ENST00000590701 PLEKHA4Q9H4M7 779 aa16.37■□□□□ 0.21
ERCC1-211ENST00000590701 CHST7Q9NS84 486 aa16.37■□□□□ 0.21
ERCC1-211ENST00000590701 BMP2KQ9NSY1 1161 aaPredicted RBP16.37■□□□□ 0.21
ERCC1-211ENST00000590701 VPS54Q9P1Q0 977 aa16.37■□□□□ 0.21
ERCC1-211ENST00000590701 NCDNQ9UBB6 729 aa16.37■□□□□ 0.21
ERCC1-211ENST00000590701 HES2Q9Y543 173 aa16.37■□□□□ 0.21
ERCC1-211ENST00000590701 COL4A3BPQ9Y5P4 624 aa16.37■□□□□ 0.21
ERCC1-211ENST00000590701 EPG5Q9HCE0 2579 aa16.37■□□□□ 0.21
ERCC1-211ENST00000590701 CNTNAP2Q9UHC6 1331 aa16.37■□□□□ 0.21
ERCC1-211ENST00000590701 KANSL1LA0AUZ9 987 aa16.36■□□□□ 0.21
ERCC1-211ENST00000590701 DCDC2BA2VCK2 349 aa16.36■□□□□ 0.21
ERCC1-211ENST00000590701 ARL5CA6NH57 179 aa16.36■□□□□ 0.21
ERCC1-211ENST00000590701 PAPLNO95428 1278 aa16.36■□□□□ 0.21
ERCC1-211ENST00000590701 TDP2O95551 362 aa16.36■□□□□ 0.21
ERCC1-211ENST00000590701 SLC44A4Q53GD3 710 aa16.36■□□□□ 0.21
ERCC1-211ENST00000590701 ELMSAN1Q6PJG2 1045 aa16.36■□□□□ 0.21
ERCC1-211ENST00000590701 GRASPQ7Z6J2 395 aaPredicted RBP16.36■□□□□ 0.21
ERCC1-211ENST00000590701 TBCKQ8TEA7 893 aa16.36■□□□□ 0.21
ERCC1-211ENST00000590701 HDAC7Q8WUI4 952 aa16.36■□□□□ 0.21
ERCC1-211ENST00000590701 ZFP42Q96MM3 310 aa16.36■□□□□ 0.21
ERCC1-211ENST00000590701 FAM170BA6NMN3 283 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 EML1O00423 815 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 LAMTOR5O43504 91 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 FSHRP23945 695 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 MLH1P40692 756 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 SCNN1GP51170 649 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 DSC1Q08554 894 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 UBXN2BQ14CS0 331 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 RNF20Q5VTR2 975 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 TSSK4Q6SA08 328 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 SRGAP1Q7Z6B7 1085 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 RDM1Q8NG50 284 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 BICD2Q8TD16 824 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 SHDQ96IW2 340 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 CPB2Q96IY4 423 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 APOL6Q9BWW8 343 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 IPPQ9Y573 584 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 PATJQ8NI35 1801 aa16.35■□□□□ 0.21
ERCC1-211ENST00000590701 ZMYND10O75800 440 aa16.34■□□□□ 0.21
ERCC1-211ENST00000590701 PSMC5P62195 406 aa16.34■□□□□ 0.21
ERCC1-211ENST00000590701 FGD1P98174 961 aa16.34■□□□□ 0.21
ERCC1-211ENST00000590701 LAMTOR4Q0VGL1 99 aa16.34■□□□□ 0.21
ERCC1-211ENST00000590701 ZNF528Q3MIS6 628 aa16.34■□□□□ 0.21
ERCC1-211ENST00000590701 Q4G0T1 1027 aa16.34■□□□□ 0.21
ERCC1-211ENST00000590701 PRSS55Q6UWB4 352 aaPredicted RBP16.34■□□□□ 0.21
ERCC1-211ENST00000590701 Q6ZUG5 572 aa16.34■□□□□ 0.21
ERCC1-211ENST00000590701 ATRIPQ8WXE1 791 aa16.34■□□□□ 0.21
ERCC1-211ENST00000590701 DDX23Q9BUQ8 820 aaKnown RBP16.34■□□□□ 0.21
ERCC1-211ENST00000590701 COLEC11Q9BWP8 271 aa16.34■□□□□ 0.21
ERCC1-211ENST00000590701 BCO2Q9BYV7 579 aa16.34■□□□□ 0.21
ERCC1-211ENST00000590701 ZDHHC7Q9NXF8 308 aa16.34■□□□□ 0.21
ERCC1-211ENST00000590701 WRAP73Q9P2S5 460 aaPredicted RBP16.34■□□□□ 0.21
ERCC1-211ENST00000590701 CACNG4Q9UBN1 327 aa16.34■□□□□ 0.21
ERCC1-211ENST00000590701 CCDC196A0A1B0GTZ2 297 aa16.33■□□□□ 0.2
ERCC1-211ENST00000590701 ZBTB39O15060 712 aa16.33■□□□□ 0.2
ERCC1-211ENST00000590701 AKAP17AQ02040 695 aaKnown RBP16.33■□□□□ 0.2
ERCC1-211ENST00000590701 MLF2Q15773 248 aaPredicted RBP16.33■□□□□ 0.2
ERCC1-211ENST00000590701 NTRK3Q16288 839 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms