RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 APBB1IPQ7Z5R6 666 aaPredicted RBP23.42■■□□□ 1.34
ATG4D-212ENST00000590096 SFR1Q86XK3 245 aa23.42■■□□□ 1.34
ATG4D-212ENST00000590096 CCDC65Q8IXS2 484 aa23.42■■□□□ 1.34
ATG4D-212ENST00000590096 HACE1Q8IYU2 909 aa23.42■■□□□ 1.34
ATG4D-212ENST00000590096 FAM161BQ96MY7 647 aa23.42■■□□□ 1.34
ATG4D-212ENST00000590096 EIF2AQ9BY44 585 aaKnown RBP23.42■■□□□ 1.34
ATG4D-212ENST00000590096 TRIM9Q9C026 710 aa23.42■■□□□ 1.34
ATG4D-212ENST00000590096 PDZD7Q9H5P4 517 aa23.42■■□□□ 1.34
ATG4D-212ENST00000590096 PANK4Q9NVE7 773 aa23.42■■□□□ 1.34
ATG4D-212ENST00000590096 TTLL13PA6NNM8 815 aa23.41■■□□□ 1.34
ATG4D-212ENST00000590096 EDN1P05305 212 aa23.41■■□□□ 1.34
ATG4D-212ENST00000590096 AFMP43652 599 aa23.41■■□□□ 1.34
ATG4D-212ENST00000590096 ASIC1P78348 528 aa23.41■■□□□ 1.34
ATG4D-212ENST00000590096 LONRF3Q496Y0 759 aa23.41■■□□□ 1.34
ATG4D-212ENST00000590096 HERC4Q5GLZ8 1057 aaPredicted RBP23.41■■□□□ 1.34
ATG4D-212ENST00000590096 NT5DC1Q5TFE4 455 aa23.41■■□□□ 1.34
ATG4D-212ENST00000590096 LPPQ93052 612 aa23.41■■□□□ 1.34
ATG4D-212ENST00000590096 TGS1Q96RS0 853 aaKnown RBP23.41■■□□□ 1.34
ATG4D-212ENST00000590096 TMEM117Q9H0C3 514 aa23.41■■□□□ 1.34
ATG4D-212ENST00000590096 USP20Q9Y2K6 914 aa23.41■■□□□ 1.34
ATG4D-212ENST00000590096 IPPQ9Y573 584 aa23.41■■□□□ 1.34
ATG4D-212ENST00000590096 FNDC1Q4ZHG4 1894 aaPredicted RBP23.41■■□□□ 1.34
ATG4D-212ENST00000590096 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.4■■□□□ 1.34
ATG4D-212ENST00000590096 ACTN4O43707 911 aaKnown RBP23.4■■□□□ 1.34
ATG4D-212ENST00000590096 ARHGEF15O94989 841 aa23.4■■□□□ 1.34
ATG4D-212ENST00000590096 MRPL10Q7Z7H8 261 aaKnown RBP23.4■■□□□ 1.34
ATG4D-212ENST00000590096 HELQQ8TDG4 1101 aa23.4■■□□□ 1.34
ATG4D-212ENST00000590096 BICD1Q96G01 975 aa23.4■■□□□ 1.34
ATG4D-212ENST00000590096 C7orf25Q9BPX7 421 aa23.4■■□□□ 1.34
ATG4D-212ENST00000590096 GOLPH3LQ9H4A5 285 aa23.4■■□□□ 1.34
ATG4D-212ENST00000590096 MRPL44Q9H9J2 332 aaKnown RBP23.4■■□□□ 1.34
ATG4D-212ENST00000590096 FRMD3A2A2Y4 597 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 ITGA4P13612 1032 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 NMT1P30419 496 aaKnown RBP23.39■■□□□ 1.33
ATG4D-212ENST00000590096 DCAF4L1Q3SXM0 396 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 CLLU1OSQ5K130 101 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 CNNM4Q6P4Q7 775 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 GLB1LQ6UWU2 654 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 SMG8Q8ND04 991 aaKnown RBP23.39■■□□□ 1.33
ATG4D-212ENST00000590096 RSPH1Q8WYR4 309 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 KCNN1Q92952 543 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 SAMD11Q96NU1 681 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 CASD1Q96PB1 797 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 FIZ1Q96SL8 496 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 ACO2Q99798 780 aaKnown RBP23.39■■□□□ 1.33
ATG4D-212ENST00000590096 CERS4Q9HA82 394 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 UBN1Q9NPG3 1134 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 RNF19AQ9NV58 838 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 MTUS1Q9ULD2 1270 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 TNFSF13BQ9Y275 285 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 RWDD3Q9Y3V2 267 aa23.39■■□□□ 1.33
ATG4D-212ENST00000590096 ERVK-21P61565 698 aa23.38■■□□□ 1.33
ATG4D-212ENST00000590096 COASYQ13057 564 aa23.38■■□□□ 1.33
ATG4D-212ENST00000590096 SPOUT1Q5T280 376 aaKnown RBP23.38■■□□□ 1.33
ATG4D-212ENST00000590096 EEF1DP3Q658K8 133 aa23.38■■□□□ 1.33
ATG4D-212ENST00000590096 ARNTL2Q8WYA1 636 aa23.38■■□□□ 1.33
ATG4D-212ENST00000590096 PAGE5Q96GU1 130 aa23.38■■□□□ 1.33
ATG4D-212ENST00000590096 CCDC34Q96HJ3 373 aa23.38■■□□□ 1.33
ATG4D-212ENST00000590096 TARS2Q9BW92 718 aaKnown RBP23.38■■□□□ 1.33
ATG4D-212ENST00000590096 APOL6Q9BWW8 343 aa23.38■■□□□ 1.33
ATG4D-212ENST00000590096 MRPL9Q9BYD2 267 aaKnown RBP23.38■■□□□ 1.33
ATG4D-212ENST00000590096 BLZF1Q9H2G9 400 aa23.38■■□□□ 1.33
ATG4D-212ENST00000590096 RSAD1Q9HA92 442 aa23.38■■□□□ 1.33
ATG4D-212ENST00000590096 OLFML3Q9NRN5 406 aa23.38■■□□□ 1.33
ATG4D-212ENST00000590096 TBC1D7Q9P0N9 293 aa23.38■■□□□ 1.33
ATG4D-212ENST00000590096 TBX20Q9UMR3 447 aa23.38■■□□□ 1.33
ATG4D-212ENST00000590096 NLRC5Q86WI3 1866 aa23.37■■□□□ 1.33
ATG4D-212ENST00000590096 ZNF202O95125 648 aa23.37■■□□□ 1.33
ATG4D-212ENST00000590096 GTF2BQ00403 316 aa23.37■■□□□ 1.33
ATG4D-212ENST00000590096 GRIN2CQ14957 1233 aa23.37■■□□□ 1.33
ATG4D-212ENST00000590096 AGMOQ6ZNB7 445 aa23.37■■□□□ 1.33
ATG4D-212ENST00000590096 ZNF720Q7Z2F6 126 aa23.37■■□□□ 1.33
ATG4D-212ENST00000590096 GRAMD1CQ8IYS0 662 aa23.37■■□□□ 1.33
ATG4D-212ENST00000590096 LRRC43Q8N309 656 aa23.37■■□□□ 1.33
ATG4D-212ENST00000590096 C17orf80Q9BSJ5 609 aa23.37■■□□□ 1.33
ATG4D-212ENST00000590096 TCHPQ9BT92 498 aa23.37■■□□□ 1.33
ATG4D-212ENST00000590096 NXF3Q9H4D5 531 aaKnown RBP23.37■■□□□ 1.33
ATG4D-212ENST00000590096 ST6GALNAC4Q9H4F1 302 aa23.37■■□□□ 1.33
ATG4D-212ENST00000590096 INPP5FQ9Y2H2 1132 aa23.37■■□□□ 1.33
ATG4D-212ENST00000590096 HES2Q9Y543 173 aa23.37■■□□□ 1.33
ATG4D-212ENST00000590096 MRPL42Q9Y6G3 142 aaKnown RBP23.37■■□□□ 1.33
ATG4D-212ENST00000590096 RALGAPA2Q2PPJ7 1873 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 MEIS3P2A8K0S8 358 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 GCNT3O95395 438 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 CUL4BQ13620 913 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 ALCAMQ13740 583 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 ZNF568Q3ZCX4 644 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 MPZL3Q6UWV2 235 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 ZPBP2Q6X784 338 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 UNC13DQ70J99 1090 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 SPRED2Q7Z698 418 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 TMEM192Q8IY95 271 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 URGCPQ8TCY9 931 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 CLP1Q92989 425 aaKnown RBP23.36■■□□□ 1.33
ATG4D-212ENST00000590096 HVCN1Q96D96 273 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 MTMR10Q9NXD2 777 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 PARP2Q9UGN5 583 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 PCDHB13Q9Y5F0 798 aa23.36■■□□□ 1.33
ATG4D-212ENST00000590096 MYO9BQ13459 2157 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 HNRNPDLO14979 420 aaKnown RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms