RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 KANSL3Q9P2N6 904 aa20.86■□□□□ 0.93
TRIM47-205ENST00000587774 USP34Q70CQ2 3546 aa20.85■□□□□ 0.93
TRIM47-205ENST00000587774 B4GALT5O43286 388 aa20.85■□□□□ 0.93
TRIM47-205ENST00000587774 MED24O75448 989 aa20.85■□□□□ 0.93
TRIM47-205ENST00000587774 ZXDAP98168 799 aa20.85■□□□□ 0.93
TRIM47-205ENST00000587774 ITIH3Q06033 890 aa20.85■□□□□ 0.93
TRIM47-205ENST00000587774 CES5AQ6NT32 575 aa20.85■□□□□ 0.93
TRIM47-205ENST00000587774 CATSPER3Q86XQ3 398 aa20.85■□□□□ 0.93
TRIM47-205ENST00000587774 RNF39Q9H2S5 420 aa20.85■□□□□ 0.93
TRIM47-205ENST00000587774 ADAM7Q9H2U9 754 aa20.85■□□□□ 0.93
TRIM47-205ENST00000587774 NXF3Q9H4D5 531 aaKnown RBP20.85■□□□□ 0.93
TRIM47-205ENST00000587774 TUFT1Q9NNX1 390 aa20.85■□□□□ 0.93
TRIM47-205ENST00000587774 UBN1Q9NPG3 1134 aa20.85■□□□□ 0.93
TRIM47-205ENST00000587774 GPRC5CQ9NQ84 441 aa20.85■□□□□ 0.93
TRIM47-205ENST00000587774 MARCH5Q9NX47 278 aa20.85■□□□□ 0.93
TRIM47-205ENST00000587774 ARL5CA6NH57 179 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 NRP1O14786 923 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 INPPL1O15357 1258 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 SSBP05455 408 aaKnown RBP eCLIP20.84■□□□□ 0.93
TRIM47-205ENST00000587774 WEE2P0C1S8 567 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 OR52Z1P0C646 297 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 RARS2Q5T160 578 aaKnown RBP20.84■□□□□ 0.93
TRIM47-205ENST00000587774 POTEGQ6S5H5 508 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 TRIM67Q6ZTA4 783 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 MAEAQ7L5Y9 396 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 C12orf76Q8N812 135 aaPredicted RBP20.84■□□□□ 0.93
TRIM47-205ENST00000587774 TMEM87AQ8NBN3 555 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 SLC22A17Q8WUG5 538 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 ZFP42Q96MM3 310 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 GAD1Q99259 594 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 KIF2CQ99661 725 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 APOL6Q9BWW8 343 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 TRIM6Q9C030 488 aaPredicted RBP20.84■□□□□ 0.93
TRIM47-205ENST00000587774 FOXP1Q9H334 677 aaPredicted RBP20.84■□□□□ 0.93
TRIM47-205ENST00000587774 TSHZ2Q9NRE2 1034 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 DZANK1Q9NVP4 752 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 FAN1Q9Y2M0 1017 aa20.84■□□□□ 0.93
TRIM47-205ENST00000587774 PRG3Q9Y2Y8 225 aaPredicted RBP20.84■□□□□ 0.93
TRIM47-205ENST00000587774 TMEM221A6NGB7 291 aa20.83■□□□□ 0.93
TRIM47-205ENST00000587774 M0R296 226 aa20.83■□□□□ 0.93
TRIM47-205ENST00000587774 XRCC6P12956 609 aaKnown RBP eCLIP20.83■□□□□ 0.93
TRIM47-205ENST00000587774 HOXD11P31277 338 aaPredicted RBP20.83■□□□□ 0.93
TRIM47-205ENST00000587774 SCNN1GP51170 649 aa20.83■□□□□ 0.93
TRIM47-205ENST00000587774 NCBP1Q09161 790 aaKnown RBP20.83■□□□□ 0.93
TRIM47-205ENST00000587774 ZNF174Q15697 407 aa20.83■□□□□ 0.93
TRIM47-205ENST00000587774 PTPN21Q16825 1174 aa20.83■□□□□ 0.93
TRIM47-205ENST00000587774 KANK3Q6NY19 840 aa20.83■□□□□ 0.93
TRIM47-205ENST00000587774 CDR2LQ86X02 465 aaPredicted RBP20.83■□□□□ 0.93
TRIM47-205ENST00000587774 COLGALT2Q8IYK4 626 aa20.83■□□□□ 0.93
TRIM47-205ENST00000587774 FBXO18Q8NFZ0 1043 aa20.83■□□□□ 0.93
TRIM47-205ENST00000587774 NECTIN4Q96NY8 510 aa20.83■□□□□ 0.93
TRIM47-205ENST00000587774 STK39Q9UEW8 545 aa20.83■□□□□ 0.93
TRIM47-205ENST00000587774 DBR1Q9UK59 544 aaKnown RBP20.83■□□□□ 0.93
TRIM47-205ENST00000587774 MYH15Q9Y2K3 1946 aa20.82■□□□□ 0.92
TRIM47-205ENST00000587774 MYO15AQ9UKN7 3530 aa20.82■□□□□ 0.92
TRIM47-205ENST00000587774 LRRIQ4A6NIV6 560 aa20.82■□□□□ 0.92
TRIM47-205ENST00000587774 ALDH2P05091 517 aa20.82■□□□□ 0.92
TRIM47-205ENST00000587774 HMGN5P82970 282 aaKnown RBP20.82■□□□□ 0.92
TRIM47-205ENST00000587774 DSC1Q08554 894 aa20.82■□□□□ 0.92
TRIM47-205ENST00000587774 ORC2Q13416 577 aaPredicted RBP20.82■□□□□ 0.92
TRIM47-205ENST00000587774 C8orf34Q49A92 452 aa20.82■□□□□ 0.92
TRIM47-205ENST00000587774 TTC38Q5R3I4 469 aa20.82■□□□□ 0.92
TRIM47-205ENST00000587774 KIAA1841Q6NSI8 718 aa20.82■□□□□ 0.92
TRIM47-205ENST00000587774 SLC27A1Q6PCB7 646 aa20.82■□□□□ 0.92
TRIM47-205ENST00000587774 MCPH1Q8NEM0 835 aa20.82■□□□□ 0.92
TRIM47-205ENST00000587774 FEZF2Q8TBJ5 459 aa20.82■□□□□ 0.92
TRIM47-205ENST00000587774 MFSD14AQ96MC6 490 aa20.82■□□□□ 0.92
TRIM47-205ENST00000587774 POLR3CQ9BUI4 534 aaPredicted RBP20.82■□□□□ 0.92
TRIM47-205ENST00000587774 NR2E1Q9Y466 385 aa20.82■□□□□ 0.92
TRIM47-205ENST00000587774 F8W810 466 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 NPTXRO95502 500 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 CNPP09543 421 aaKnown RBP20.81■□□□□ 0.92
TRIM47-205ENST00000587774 RPA1P27694 616 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 MTHFRP42898 656 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 OR1G1P47890 313 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 NBR1Q14596 966 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 CDCA2Q69YH5 1023 aaPredicted RBP20.81■□□□□ 0.92
TRIM47-205ENST00000587774 BMP8AQ7Z5Y6 402 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 PPFIBP1Q86W92 1011 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 NOSTRINQ8IVI9 506 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 ZSCAN31Q96LW9 406 aaPredicted RBP20.81■□□□□ 0.92
TRIM47-205ENST00000587774 RIPOR3Q96MK2 946 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 KLHL5Q96PQ7 755 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 NACC1Q96RE7 527 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 HERC2P3Q9BVR0 1158 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 SH2B1Q9NRF2 756 aaPredicted RBP20.81■□□□□ 0.92
TRIM47-205ENST00000587774 MIOSQ9NXC5 875 aa20.81■□□□□ 0.92
TRIM47-205ENST00000587774 ANK1P16157 1881 aa20.8■□□□□ 0.92
TRIM47-205ENST00000587774 C2CD4DB7Z1M9 353 aa20.8■□□□□ 0.92
TRIM47-205ENST00000587774 C2CD2LO14523 706 aa20.8■□□□□ 0.92
TRIM47-205ENST00000587774 LILRB3O75022 631 aa20.8■□□□□ 0.92
TRIM47-205ENST00000587774 SOD2P04179 222 aa20.8■□□□□ 0.92
TRIM47-205ENST00000587774 AKAP5P24588 427 aa20.8■□□□□ 0.92
TRIM47-205ENST00000587774 RBM25P49756 843 aaKnown RBP20.8■□□□□ 0.92
TRIM47-205ENST00000587774 CLCN4P51793 760 aa20.8■□□□□ 0.92
TRIM47-205ENST00000587774 SIGLEC14Q08ET2 396 aa20.8■□□□□ 0.92
TRIM47-205ENST00000587774 GNL2Q13823 731 aaKnown RBP20.8■□□□□ 0.92
TRIM47-205ENST00000587774 CABP7Q86V35 215 aa20.8■□□□□ 0.92
TRIM47-205ENST00000587774 HACE1Q8IYU2 909 aa20.8■□□□□ 0.92
TRIM47-205ENST00000587774 RNF168Q8IYW5 571 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms