RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 MYOCDQ8IZQ8 938 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 TET1Q8NFU7 2136 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 SPATA20Q8TB22 786 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 HPS3Q969F9 1004 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 PGBD4Q96DM1 585 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 ACO2Q99798 780 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 TARS2Q9BW92 718 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 TRAIPQ9BWF2 469 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 STRA6Q9BX79 667 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 PDZD7Q9H5P4 517 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 TNFSF13BQ9Y275 285 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 PCDHB7Q9Y5E2 793 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 A0A0U1RQF3 1178 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 C9IYK1 514 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 PRPF6O94906 941 aaKnown RBP15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 NPTXRO95502 500 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 PIGRP01833 764 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 IBSPP21815 317 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 PPP1R2P41236 205 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 CASP5P51878 434 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 STIM1Q13586 685 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 HSP90AA2PQ14568 343 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 ZNF568Q3ZCX4 644 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 C9orf50Q5SZB4 431 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 CCDC183Q5T5S1 534 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 ZNF658Q5TYW1 1059 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 MPZL3Q6UWV2 235 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 EPM2AIP1Q7L775 607 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 HS2ST1Q7LGA3 356 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 MICAL3Q7RTP6 2002 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 NPAS4Q8IUM7 802 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 TRIML1Q8N9V2 468 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 PHOSPHO2Q8TCD6 241 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 ZNF507Q8TCN5 953 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 LINC01599Q8WXQ3 324 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 ELAC1Q9H777 363 aaKnown RBP15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 FAM105AQ9NUU6 356 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 KIAA1468Q9P260 1216 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 ANKFY1Q9P2R3 1169 aa15.98■□□□□ 0.15
SCAMP4-209ENST00000585335 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 A0A1W2PPC1 479 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 CLDN3O15551 220 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 HOXA2O43364 376 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 EOMESO95936 686 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 MCF2P10911 925 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 ATP2A2P16615 1042 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 SNRPFP62306 86 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 STK4Q13043 487 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 NOLC1Q14978 699 aaKnown RBP eCLIP15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 BMT2Q1RMZ1 405 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 ECHDC2Q86YB7 292 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 RNF169Q8NCN4 708 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 KIAA0895Q8NCT3 520 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 GOLGA5Q8TBA6 731 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 ERCC4Q92889 916 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 ZBED2Q9BTP6 218 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 FGFBP2Q9BYJ0 223 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 TMEM161AQ9NX61 479 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 CGNQ9P2M7 1197 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 MAN1B1Q9UKM7 699 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 PCDHB2Q9Y5E7 798 aa15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 TNRC18O15417 2968 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-209ENST00000585335 ZNF623O75123 536 aa15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 FAM189BP81408 668 aa15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 KYAT1Q16773 422 aa15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 KNOP1Q1ED39 458 aaKnown RBP15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 KLHL40Q2TBA0 621 aa15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 RASIP1Q5U651 963 aa15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 ZBTB33Q86T24 672 aa15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 RTN4RL1Q86UN2 441 aaPredicted RBP15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 NELFCDQ8IXH7 590 aa15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 ABI1Q8IZP0 508 aa15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 SCFD1Q8WVM8 642 aa15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 RSPH1Q8WYR4 309 aa15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 EIF2AQ9BY44 585 aaKnown RBP15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 GBP3Q9H0R5 595 aa15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 UBN1Q9NPG3 1134 aa15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 CXXC1Q9P0U4 656 aaPredicted RBP15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 USP20Q9Y2K6 914 aa15.96■□□□□ 0.15
SCAMP4-209ENST00000585335 TTLL13PA6NNM8 815 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 BIN1O00499 593 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 KIAA0391O15091 583 aaKnown RBP15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 UPP2O95045 317 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 SLC34A2O95436 690 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 EDN1P05305 212 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 HARSP12081 509 aaKnown RBP15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 ITGA4P13612 1032 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 PROZP22891 400 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 DEFB103AP81534 67 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 MCL1Q07820 350 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 UBXN11Q5T124 520 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 EEF1DP3Q658K8 133 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 CDR2LQ86X02 465 aaPredicted RBP15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 GUF1Q8N442 669 aaKnown RBP15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 GLIS3Q8NEA6 775 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 POMGNT1Q8WZA1 660 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 TOP1MTQ969P6 601 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 MSTO1Q9BUK6 570 aa15.95■□□□□ 0.14
SCAMP4-209ENST00000585335 CCDC94Q9BW85 323 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms