RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 RHOBTB2Q9BYZ6 727 aa16.72■□□□□ 0.27
VAPA-209ENST00000585042 DAXXQ9UER7 740 aaPredicted RBP16.72■□□□□ 0.27
VAPA-209ENST00000585042 KMT2EQ8IZD2 1858 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 NR1I2O75469 434 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 DGAT1O75907 488 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 SOD2P04179 222 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 CNPP09543 421 aaKnown RBP16.71■□□□□ 0.27
VAPA-209ENST00000585042 SP100P23497 879 aaPredicted RBP16.71■□□□□ 0.27
VAPA-209ENST00000585042 CTTNQ14247 550 aaKnown RBP16.71■□□□□ 0.27
VAPA-209ENST00000585042 OTOP3Q7RTS5 596 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 COLGALT2Q8IYK4 626 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 GPR65Q8IYL9 337 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 HACE1Q8IYU2 909 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 SMG8Q8ND04 991 aaKnown RBP16.71■□□□□ 0.27
VAPA-209ENST00000585042 CMASQ8NFW8 434 aaPredicted RBP16.71■□□□□ 0.27
VAPA-209ENST00000585042 TNFRSF25Q93038 417 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 EIF2AK1Q9BQI3 630 aaKnown RBP16.71■□□□□ 0.27
VAPA-209ENST00000585042 CSRNP2Q9H175 543 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 GJB4Q9NTQ9 266 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 LIMD1Q9UGP4 676 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 CDH22Q9UJ99 828 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 GIT1Q9Y2X7 761 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 IPPQ9Y573 584 aa16.71■□□□□ 0.27
VAPA-209ENST00000585042 B4GALT3O60512 393 aa16.7■□□□□ 0.26
VAPA-209ENST00000585042 EIF5BO60841 1220 aaKnown RBP16.7■□□□□ 0.26
VAPA-209ENST00000585042 BRD1O95696 1058 aa16.7■□□□□ 0.26
VAPA-209ENST00000585042 EFEMP2O95967 443 aa16.7■□□□□ 0.26
VAPA-209ENST00000585042 POMCP01189 267 aa16.7■□□□□ 0.26
VAPA-209ENST00000585042 FDPSP14324 419 aaKnown RBP16.7■□□□□ 0.26
VAPA-209ENST00000585042 AFF1P51825 1210 aaKnown RBP16.7■□□□□ 0.26
VAPA-209ENST00000585042 VCPP55072 806 aaKnown RBP16.7■□□□□ 0.26
VAPA-209ENST00000585042 CYP4A11Q02928 519 aa16.7■□□□□ 0.26
VAPA-209ENST00000585042 EARS2Q5JPH6 523 aaKnown RBP16.7■□□□□ 0.26
VAPA-209ENST00000585042 HDAC7Q8WUI4 952 aa16.7■□□□□ 0.26
VAPA-209ENST00000585042 XPNPEP1Q9NQW7 623 aa16.7■□□□□ 0.26
VAPA-209ENST00000585042 ZMYM2Q9UBW7 1377 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 ARL5CA6NH57 179 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 ZBTB39O15060 712 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 GALR2O43603 387 aaPredicted RBP16.69■□□□□ 0.26
VAPA-209ENST00000585042 TSPAN1O60635 241 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 URODP06132 367 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 ADH1AP07327 375 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 WEE2P0C1S8 567 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 ARL2P36404 184 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 AK2P54819 239 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 DSC1Q08554 894 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 NR5A1Q13285 461 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 CALCRLQ16602 461 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 TMC5Q6UXY8 1006 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 CCDC149Q6ZUS6 474 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 RNF168Q8IYW5 571 aaPredicted RBP16.69■□□□□ 0.26
VAPA-209ENST00000585042 RPS6KC1Q96S38 1066 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 HERC2P3Q9BVR0 1158 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 COLEC11Q9BWP8 271 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 TTC12Q9H892 705 aaPredicted RBP16.69■□□□□ 0.26
VAPA-209ENST00000585042 RXFP1Q9HBX9 757 aa16.69■□□□□ 0.26
VAPA-209ENST00000585042 SPDYE4A6NLX3 237 aa16.68■□□□□ 0.26
VAPA-209ENST00000585042 INO80B-WBP1J3KQ70 363 aa16.68■□□□□ 0.26
VAPA-209ENST00000585042 ST18O60284 1047 aa16.68■□□□□ 0.26
VAPA-209ENST00000585042 PAPLNO95428 1278 aa16.68■□□□□ 0.26
VAPA-209ENST00000585042 CLCN5P51795 746 aa16.68■□□□□ 0.26
VAPA-209ENST00000585042 KIAA0319Q5VV43 1072 aa16.68■□□□□ 0.26
VAPA-209ENST00000585042 KANK3Q6NY19 840 aa16.68■□□□□ 0.26
VAPA-209ENST00000585042 PHOX2BQ99453 314 aa16.68■□□□□ 0.26
VAPA-209ENST00000585042 EIF2AQ9BY44 585 aaKnown RBP16.68■□□□□ 0.26
VAPA-209ENST00000585042 PROB1E7EW31 1015 aa16.67■□□□□ 0.26
VAPA-209ENST00000585042 OR1G1P47890 313 aa16.67■□□□□ 0.26
VAPA-209ENST00000585042 RARRES1P49788 294 aa16.67■□□□□ 0.26
VAPA-209ENST00000585042 DSG1Q02413 1049 aa16.67■□□□□ 0.26
VAPA-209ENST00000585042 MBTD1Q05BQ5 628 aa16.67■□□□□ 0.26
VAPA-209ENST00000585042 AMHR2Q16671 573 aa16.67■□□□□ 0.26
VAPA-209ENST00000585042 ASTLQ6HA08 431 aaPredicted RBP16.67■□□□□ 0.26
VAPA-209ENST00000585042 GTF3C6Q969F1 213 aa16.67■□□□□ 0.26
VAPA-209ENST00000585042 MTMR9Q96QG7 549 aa16.67■□□□□ 0.26
VAPA-209ENST00000585042 GAD1Q99259 594 aa16.67■□□□□ 0.26
VAPA-209ENST00000585042 TRIM6Q9C030 488 aaPredicted RBP16.67■□□□□ 0.26
VAPA-209ENST00000585042 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.67■□□□□ 0.264e-10■□□□□ 11.3
VAPA-209ENST00000585042 CHST7Q9NS84 486 aa16.67■□□□□ 0.26
VAPA-209ENST00000585042 BMP2KQ9NSY1 1161 aaPredicted RBP16.67■□□□□ 0.26
VAPA-209ENST00000585042 MARCH5Q9NX47 278 aa16.67■□□□□ 0.26
VAPA-209ENST00000585042 IGSF9Q9P2J2 1179 aa16.67■□□□□ 0.26
VAPA-209ENST00000585042 ARID2Q68CP9 1835 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 A0A1B0GUA9 196 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 FAM205CA6NFA0 338 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 BTBD18B2RXH4 712 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 NEMFO60524 1076 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 PDGFBP01127 241 aaPredicted RBP16.66■□□□□ 0.26
VAPA-209ENST00000585042 SSBP05455 408 aaKnown RBP eCLIP16.66■□□□□ 0.26
VAPA-209ENST00000585042 ASGR2P07307 311 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 ARF4P18085 180 aaPredicted RBP16.66■□□□□ 0.26
VAPA-209ENST00000585042 GLRA2P23416 452 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 GLUD2P49448 558 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 TDGQ13569 410 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 CAPSQ13938 189 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 TRIM29Q14134 588 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 ME3Q16798 604 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 SLC27A1Q6PCB7 646 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 STAMQ92783 540 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 ATOH1Q92858 354 aaPredicted RBP16.66■□□□□ 0.26
VAPA-209ENST00000585042 NXPE3Q969Y0 559 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms