RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 RCAN1P53805 252 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 MARSP56192 900 aaKnown RBP8.78□□□□□ -1
SMCHD1-210ENST00000583800 FGD1P98174 961 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 NR1H3Q13133 447 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 DRP2Q13474 957 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 MTMR3Q13615 1198 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 TSGA10IPQ3SY00 556 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 Q6ZUG5 572 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 TMEM173Q86WV6 379 aaPredicted RBP8.78□□□□□ -1
SMCHD1-210ENST00000583800 KREMEN2Q8NCW0 462 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 FEZF2Q8TBJ5 459 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 GIPC2Q8TF65 315 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 CCDC12Q8WUD4 166 aaPredicted RBP8.78□□□□□ -1
SMCHD1-210ENST00000583800 AUTS2Q8WXX7 1259 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 ATOH1Q92858 354 aaPredicted RBP8.78□□□□□ -1
SMCHD1-210ENST00000583800 BRF1Q92994 677 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 PHKBQ93100 1093 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 GJA10Q969M2 543 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 RIPOR3Q96MK2 946 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 DISC1Q9NRI5 854 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 NR2E1Q9Y466 385 aa8.78□□□□□ -1
SMCHD1-210ENST00000583800 TDRD15B5MCY1 1934 aaKnown RBP8.78□□□□□ -1
SMCHD1-210ENST00000583800 MYO15AQ9UKN7 3530 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 A0A0U1RQF3 1178 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 LOC100996750A0A140TA64 210 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 TMEM150BA6NC51 233 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 J3QL48 77 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 PRPF3O43395 683 aaKnown RBP8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 ZC3H11AO75152 810 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 ASGR2P07307 311 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 EPCAMP16422 314 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 VAMP1P23763 118 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 GNA11P29992 359 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 BCAR1P56945 870 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 ITIH3Q06033 890 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 TBC1D8BQ0IIM8 1120 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 KRT32Q14532 448 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 LONRF3Q496Y0 759 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 MTERF2Q49AM1 385 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 BMP2KLQ5H9B9 411 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 RARS2Q5T160 578 aaKnown RBP8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 CES5AQ6NT32 575 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 KANK3Q6NY19 840 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 BRICD5Q6PL45 260 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 C12orf76Q8N812 135 aaPredicted RBP8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 MRPL43Q8N983 215 aaKnown RBP8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 LPPQ93052 612 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 TMEM169Q96HH4 297 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 CCDC136Q96JN2 1154 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 SNX27Q96L92 541 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 DRC1Q96MC2 740 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 NECTIN4Q96NY8 510 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 SH2D3AQ9BRG2 576 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 TEKT3Q9BXF9 490 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 MRPL9Q9BYD2 267 aaKnown RBP8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 KRTAP4-6Q9BYQ5 205 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 ZBP1Q9H171 429 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 ADAM7Q9H2U9 754 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 UNC45AQ9H3U1 944 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 NRBP2Q9NSY0 501 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 VPS54Q9P1Q0 977 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 SORCS3Q9UPU3 1222 aa8.77□□□□□ -1.01
SMCHD1-210ENST00000583800 A0A087WZ62 844 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 CCDC196A0A1B0GTZ2 297 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 MEIS3P2A8K0S8 358 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 GAS7O60861 476 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 CXCL14O95715 111 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 EOMESO95936 686 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 MTHFRP42898 656 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 PHKA2P46019 1235 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 ALDH7A1P49419 539 aaKnown RBP8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 JAK3P52333 1124 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 TARBP2Q15633 366 aaKnown RBP8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 LRCH2Q5VUJ6 765 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 MCTP2Q6DN12 878 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 KIAA1841Q6NSI8 718 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 VPS52Q8N1B4 723 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 TMEM105Q8N8V8 129 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 TDRD5Q8NAT2 981 aaKnown RBP8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 CCDC148Q8NFR7 591 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 BCL7CQ8WUZ0 217 aaPredicted RBP8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 SLC5A5Q92911 643 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 MRGPRX2Q96LB1 330 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 JAKMIP1Q96N16 626 aaKnown RBP8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 FDXACB1Q9BRP7 624 aaPredicted RBP8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 SLC26A6Q9BXS9 759 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 DACT1Q9NYF0 836 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 INPP5FQ9Y2H2 1132 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 CFAP54Q96N23 3096 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 DOCK8Q8NF50 2099 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 FAM186AA6NE01 2351 aa8.76□□□□□ -1.01
SMCHD1-210ENST00000583800 FAM181BA6NEQ2 426 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 B4GALT3O60512 393 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 CDC45O75419 566 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 STBD1O95210 358 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 TDP2O95551 362 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 CTSAP10619 480 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 SFPQP23246 707 aaKnown RBP eCLIP8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 SFNP31947 248 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms