RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 CACNB1Q02641 598 aaPredicted RBP10.21□□□□□ -0.77
UBBP4-201ENST00000583708 PNOCQ13519 176 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 MORC3Q14149 939 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 NFIL3Q16649 462 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 KNOP1Q1ED39 458 aaKnown RBP10.21□□□□□ -0.77
UBBP4-201ENST00000583708 TMEM132AQ24JP5 1023 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 ATF7IP2Q5U623 682 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 RASIP1Q5U651 963 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 TWF2Q6IBS0 349 aaKnown RBP10.21□□□□□ -0.77
UBBP4-201ENST00000583708 ZNF365Q70YC5 407 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 DEFB128Q7Z7B8 93 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 NPAS4Q8IUM7 802 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 SYCP3Q8IZU3 236 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 DHTKD1Q96HY7 919 aaPredicted RBP10.21□□□□□ -0.77
UBBP4-201ENST00000583708 SLC9A7Q96T83 725 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 ADAM2Q99965 735 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 PTPRHQ9HD43 1115 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 TMEM161AQ9NX61 479 aa10.21□□□□□ -0.77
UBBP4-201ENST00000583708 PIN4Q9Y237 131 aaKnown RBP10.21□□□□□ -0.77
UBBP4-201ENST00000583708 ADGRA3Q8IWK6 1321 aa10.21□□□□□ -0.78
UBBP4-201ENST00000583708 CEP290O15078 2479 aa10.21□□□□□ -0.78
UBBP4-201ENST00000583708 C9IYK1 514 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 PSMA7O14818 248 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 HNRNPDLO14979 420 aaKnown RBP10.2□□□□□ -0.78
UBBP4-201ENST00000583708 CAPN15O75808 1086 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 CAVIN2O95810 425 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 SYN1P17600 705 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 ENPEPQ07075 957 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 MCL1Q07820 350 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 STK4Q13043 487 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 TPRNQ4KMQ1 711 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 PRPF38BQ5VTL8 546 aaKnown RBP10.2□□□□□ -0.78
UBBP4-201ENST00000583708 MPZL3Q6UWV2 235 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 C16orf59Q7L2K0 433 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 TAS1R3Q7RTX0 852 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 SLC9A9Q8IVB4 645 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 CD302Q8IX05 232 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 GRAMD1CQ8IYS0 662 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 SCFD1Q8WVM8 642 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 TOP1MTQ969P6 601 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 VWCEQ96DN2 955 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 BICD1Q96G01 975 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 TCHPQ9BT92 498 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 TRIM6Q9C030 488 aaPredicted RBP10.2□□□□□ -0.78
UBBP4-201ENST00000583708 UBE2OQ9C0C9 1292 aaKnown RBP10.2□□□□□ -0.78
UBBP4-201ENST00000583708 TMX1Q9H3N1 280 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 PLEKHA5Q9HAU0 1116 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 POLD4Q9HCU8 107 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 SLC39A2Q9NP94 309 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 FAM105AQ9NUU6 356 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 KANSL3Q9P2N6 904 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 TRAF3IP3Q9Y228 551 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 GIT1Q9Y2X7 761 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 PCDHB7Q9Y5E2 793 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 SLC4A7Q9Y6M7 1214 aa10.2□□□□□ -0.78
UBBP4-201ENST00000583708 A0A0B4J269 797 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 BICDL2A1A5D9 508 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 MAPK13O15264 365 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 OGTO15294 1046 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 CALUO43852 315 aaPredicted RBP10.19□□□□□ -0.78
UBBP4-201ENST00000583708 FGFR1OPO95684 399 aaKnown RBP10.19□□□□□ -0.78
UBBP4-201ENST00000583708 CLTAP09496 248 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 PRR29P0C7W0 189 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 GRM5P41594 1212 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 LRRC63Q05C16 580 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 SURF1Q15526 300 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 NFKBIBQ15653 356 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 CAMK4Q16566 473 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 EDRF1Q3B7T1 1238 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 SASS6Q6UVJ0 657 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 RTN4RL1Q86UN2 441 aaPredicted RBP10.19□□□□□ -0.78
UBBP4-201ENST00000583708 ECHDC2Q86YB7 292 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 CRIPAKQ8N1N5 446 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 TSG101Q99816 390 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.19□□□□□ -0.78
UBBP4-201ENST00000583708 KIFC3Q9BVG8 833 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 CCDC94Q9BW85 323 aaPredicted RBP10.19□□□□□ -0.78
UBBP4-201ENST00000583708 TARS2Q9BW92 718 aaKnown RBP10.19□□□□□ -0.78
UBBP4-201ENST00000583708 TOPORSQ9NS56 1045 aaPredicted RBP10.19□□□□□ -0.78
UBBP4-201ENST00000583708 TYW1Q9NV66 732 aaKnown RBP10.19□□□□□ -0.78
UBBP4-201ENST00000583708 ANO10Q9NW15 660 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 MAN1B1Q9UKM7 699 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 PCDHB2Q9Y5E7 798 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 ALPK3Q96L96 1907 aa10.19□□□□□ -0.78
UBBP4-201ENST00000583708 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 INPPL1O15357 1258 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 CSDE1O75534 798 aaKnown RBP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 PRPF6O94906 941 aaKnown RBP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 ADRB2P07550 413 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 MYBP10242 640 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 PAX3P23760 479 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 ERCC5P28715 1186 aaPredicted RBP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 CASP1P29466 404 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 YARSP54577 528 aaKnown RBP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 NLRP12P59046 1061 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 WDR5P61964 334 aaKnown RBP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 NOLC1Q14978 699 aaKnown RBP eCLIP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 ZC2HC1CQ53FD0 456 aaPredicted RBP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 CENPPQ6IPU0 288 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms