RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 CHST13Q8NET6 341 aa5.88□□□□□ -1.47
NF1-220ENST00000581113 SSH1Q8WYL5 1049 aa5.88□□□□□ -1.47
NF1-220ENST00000581113 SLC13A1Q9BZW2 595 aa5.88□□□□□ -1.47
NF1-220ENST00000581113 EPC1Q9H2F5 836 aa5.88□□□□□ -1.47
NF1-220ENST00000581113 DCAF1Q9Y4B6 1507 aa5.88□□□□□ -1.47
NF1-220ENST00000581113 ZNF623O75123 536 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 NDUFS2O75306 463 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 ITGA10O75578 1167 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 SNUPNO95149 360 aaKnown RBP5.87□□□□□ -1.47
NF1-220ENST00000581113 GSPT1P15170 499 aaKnown RBP5.87□□□□□ -1.47
NF1-220ENST00000581113 GYPEP15421 78 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 NEK2P51955 445 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 FOXL1Q12952 345 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 NOMO1Q15155 1222 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 C19orf54Q5BKX5 351 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 EFCAB2Q5VUJ9 269 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 FAM111BQ6SJ93 734 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.87□□□□□ -1.47
NF1-220ENST00000581113 GPR156Q8NFN8 814 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 DNERQ8NFT8 737 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 CHMP4CQ96CF2 233 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 TEKT5Q96M29 485 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 SAMD11Q96NU1 681 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 DEF6Q9H4E7 631 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 AASDHPPTQ9NRN7 309 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 RBM12Q9NTZ6 932 aaKnown RBP5.87□□□□□ -1.47
NF1-220ENST00000581113 SCOCQ9UIL1 159 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 SLC30A1Q9Y6M5 507 aa5.87□□□□□ -1.47
NF1-220ENST00000581113 PHF2O75151 1096 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 C5AR1P21730 350 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 COMTP21964 271 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 MCAMP43121 646 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 KRT85P78386 507 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 ODF1Q14990 250 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 MST1LQ2TV78 715 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 ZNF585AQ6P3V2 769 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 POLNQ7Z5Q5 900 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 Q8TCH9 128 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 ZNF480Q8WV37 535 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 C8orf49Q96NF6 230 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 SMPD4Q9NXE4 827 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 GPRC5DQ9NZD1 345 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 TUBD1Q9UJT1 453 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 CNOT11Q9UKZ1 510 aaKnown RBP5.86□□□□□ -1.47
NF1-220ENST00000581113 BICRAQ9NZM4 1560 aa5.86□□□□□ -1.47
NF1-220ENST00000581113 UNC13AQ9UPW8 1703 aa5.85□□□□□ -1.47
NF1-220ENST00000581113 ECHS1P30084 290 aa5.85□□□□□ -1.47
NF1-220ENST00000581113 PPP3CAQ08209 521 aa5.85□□□□□ -1.47
NF1-220ENST00000581113 TTF1Q15361 905 aaPredicted RBP5.85□□□□□ -1.47
NF1-220ENST00000581113 HS1BP3Q53T59 392 aa5.85□□□□□ -1.47
NF1-220ENST00000581113 D2HGDHQ8N465 521 aa5.85□□□□□ -1.47
NF1-220ENST00000581113 CDC5LQ99459 802 aaKnown RBP5.85□□□□□ -1.47
NF1-220ENST00000581113 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
NF1-220ENST00000581113 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
NF1-220ENST00000581113 INTUQ9ULD6 942 aa5.85□□□□□ -1.47
NF1-220ENST00000581113 LUC7L2Q9Y383 392 aaKnown RBP5.85□□□□□ -1.47
NF1-220ENST00000581113 ARID1BQ8NFD5 2236 aaPredicted RBP5.85□□□□□ -1.47
NF1-220ENST00000581113 ADCY6O43306 1168 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 STC2O76061 302 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 RECQLP46063 649 aaPredicted RBP5.84□□□□□ -1.47
NF1-220ENST00000581113 PER3P56645 1201 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 KIF23Q02241 960 aaPredicted RBP5.84□□□□□ -1.47
NF1-220ENST00000581113 HHEXQ03014 270 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 FAM214AQ32MH5 1076 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 ODR4Q5SWX8 454 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 FKBP15Q5T1M5 1219 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 Q6ZVL8 140 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 LILRA3Q8N6C8 439 aaPredicted RBP5.84□□□□□ -1.47
NF1-220ENST00000581113 MDM1Q8TC05 714 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 NRG4Q8WWG1 115 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 DPF2Q92785 391 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 HOOK2Q96ED9 719 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 IL17RAQ96F46 866 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 ZNF512Q96ME7 567 aaPredicted RBP5.84□□□□□ -1.47
NF1-220ENST00000581113 UHRF1Q96T88 793 aaPredicted RBP5.84□□□□□ -1.47
NF1-220ENST00000581113 CD248Q9HCU0 757 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 SAP30BPQ9UHR5 308 aaKnown RBP5.84□□□□□ -1.47
NF1-220ENST00000581113 SH3BP1Q9Y3L3 701 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 TCAF1Q9Y4C2 921 aa5.84□□□□□ -1.47
NF1-220ENST00000581113 GASTP01350 101 aa5.83□□□□□ -1.48
NF1-220ENST00000581113 S100BP04271 92 aaPredicted RBP5.83□□□□□ -1.48
NF1-220ENST00000581113 ACO1P21399 889 aaKnown RBP5.83□□□□□ -1.48
NF1-220ENST00000581113 PTPN7P35236 360 aa5.83□□□□□ -1.48
NF1-220ENST00000581113 GZMKP49863 264 aa5.83□□□□□ -1.48
NF1-220ENST00000581113 SLC16A1P53985 500 aa5.83□□□□□ -1.48
NF1-220ENST00000581113 MGAT2Q10469 447 aa5.83□□□□□ -1.48
NF1-220ENST00000581113 ELAVL1Q15717 326 aaKnown RBP5.83□□□□□ -1.48
NF1-220ENST00000581113 PLEKHG6Q3KR16 790 aa5.83□□□□□ -1.48
NF1-220ENST00000581113 GJC2Q5T442 439 aaPredicted RBP5.83□□□□□ -1.48
NF1-220ENST00000581113 SGMS1Q86VZ5 419 aa5.83□□□□□ -1.48
NF1-220ENST00000581113 THEMISQ8N1K5 641 aaPredicted RBP5.83□□□□□ -1.48
NF1-220ENST00000581113 TTC9BQ8N6N2 239 aa5.83□□□□□ -1.48
NF1-220ENST00000581113 WWC2-AS2Q96NR7 200 aa5.83□□□□□ -1.48
NF1-220ENST00000581113 ADOQ96SZ5 270 aa5.83□□□□□ -1.48
NF1-220ENST00000581113 TRPS1Q9UHF7 1281 aa5.83□□□□□ -1.48
NF1-220ENST00000581113 ZMYM3Q14202 1370 aa5.83□□□□□ -1.48
NF1-220ENST00000581113 CAPN14A8MX76 684 aa5.83□□□□□ -1.48
NF1-220ENST00000581113 HOXA3O43365 443 aaPredicted RBP5.83□□□□□ -1.48
NF1-220ENST00000581113 GNAT2P19087 354 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms