RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 KRTCAP3Q53RY4 240 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 TTC39AQ5SRH9 613 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 MEI1Q5TIA1 1274 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 SYDE2Q5VT97 1194 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 C11orf88Q6PI97 169 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 TPTE2Q6XPS3 522 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 CCDC81Q6ZN84 652 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 C22orf34Q6ZV56 151 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 PLEKHM3Q6ZWE6 761 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 VPS52Q8N1B4 723 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 ZNF619Q8N2I2 560 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 LRRC71Q8N4P6 559 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 CCHCR1Q8TD31 782 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 OTUD7AQ8TE49 926 aaPredicted RBP7.18□□□□□ -1.26
COPS3-216ENST00000579716 ADAMTS18Q8TE60 1221 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 DENND1AQ8TEH3 1009 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 CENPIQ92674 756 aaPredicted RBP7.18□□□□□ -1.26
COPS3-216ENST00000579716 USP13Q92995 863 aaPredicted RBP7.18□□□□□ -1.26
COPS3-216ENST00000579716 ATP2A3Q93084 1043 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 CDCA5Q96FF9 252 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 ACSBG1Q96GR2 724 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 CNDP1Q96KN2 507 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 NT5C1BQ96P26 610 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 PPP1R16BQ96T49 567 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 TREX2Q9BQ50 279 aaPredicted RBP7.18□□□□□ -1.26
COPS3-216ENST00000579716 SDF4Q9BRK5 362 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 KRTAP17-1Q9BYP8 105 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 OSBPL7Q9BZF2 842 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 VCX3BQ9H321 246 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 TCF7L1Q9HCS4 588 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 CD320Q9NPF0 282 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 INTS10Q9NVR2 710 aaKnown RBP7.18□□□□□ -1.26
COPS3-216ENST00000579716 ACTR10Q9NZ32 417 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 GRID1Q9ULK0 1009 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 SNX8Q9Y5X2 465 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 CAPN6Q9Y6Q1 641 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 ZNF804BA4D1E1 1349 aa7.18□□□□□ -1.26
COPS3-216ENST00000579716 CCDC169A6NNP5 214 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 LACTBL1A8MY62 500 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 B4E171 279 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 H0Y626 953 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 TULP2O00295 520 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 XPOTO43592 962 aaKnown RBP7.17□□□□□ -1.26
COPS3-216ENST00000579716 STX6O43752 255 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 KDM1AO60341 852 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 ZBED4O75132 1171 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 FBXO24O75426 580 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 LRIG2O94898 1065 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 SNUPNO95149 360 aaKnown RBP7.17□□□□□ -1.26
COPS3-216ENST00000579716 BAG4O95429 457 aaKnown RBP7.17□□□□□ -1.26
COPS3-216ENST00000579716 CYP1A2P05177 515 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 S100A6P06703 90 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 ATP5F1P24539 256 aaPredicted RBP7.17□□□□□ -1.26
COPS3-216ENST00000579716 GUCY2CP25092 1073 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 ATP5DP30049 168 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 HADHAP40939 763 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 BUD31P41223 144 aaPredicted RBP7.17□□□□□ -1.26
COPS3-216ENST00000579716 CDK8P49336 464 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 C21orf58P58505 322 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 DEUP1Q05D60 604 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 ADCY2Q08462 1091 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 AP1B1Q10567 949 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 STRN3Q13033 797 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 LAPTM5Q13571 262 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 KRT71Q3SY84 523 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 CDKAL1Q5VV42 579 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 HEATR6Q6AI08 1181 aaKnown RBP7.17□□□□□ -1.26
COPS3-216ENST00000579716 GPR139Q6DWJ6 353 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 ALKBH5Q6P6C2 394 aaKnown RBP7.17□□□□□ -1.26
COPS3-216ENST00000579716 LRFN4Q6PJG9 635 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 TMEM151BQ8IW70 566 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 MYCT1Q8N699 235 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 ANKRD24Q8TF21 1146 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 UBXN10Q96LJ8 280 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 CCDC138Q96M89 665 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 DIRC2Q96SL1 478 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 EDEM3Q9BZQ6 932 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 FOXQ1Q9C009 403 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 MRPL46Q9H2W6 279 aaKnown RBP7.17□□□□□ -1.26
COPS3-216ENST00000579716 SEMA4AQ9H3S1 761 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 VCPKMTQ9H867 229 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 SP110Q9HB58 689 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 XAB2Q9HCS7 855 aaKnown RBP7.17□□□□□ -1.26
COPS3-216ENST00000579716 DACT1Q9NYF0 836 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 DDX20Q9UHI6 824 aaKnown RBP7.17□□□□□ -1.26
COPS3-216ENST00000579716 ZBTB21Q9ULJ3 1066 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 JRKLQ9Y4A0 524 aa7.17□□□□□ -1.26
COPS3-216ENST00000579716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.17□□□□□ -1.26
COPS3-216ENST00000579716 GNAT3A8MTJ3 354 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 F8W031 263 aaPredicted RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 DIAPH2O60879 1101 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 RTN2O75298 545 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 ZNF254O75437 659 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 TBC1D8O95759 1140 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 PF4V1P10720 104 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 TOP1P11387 765 aaKnown RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 CCND1P24385 295 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 PBLDP30039 288 aaPredicted RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 PEX5P50542 639 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 ERVFC1P60507 584 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms