RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 SMARCE1Q969G3 411 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 GSDMAQ96QA5 445 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 TCHPQ9BT92 498 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 TARS2Q9BW92 718 aaKnown RBP17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 TRIM6Q9C030 488 aaPredicted RBP17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 TMEM206Q9H813 350 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 SLC39A2Q9NP94 309 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 FAM105AQ9NUU6 356 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 TNFSF13BQ9Y275 285 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 USP20Q9Y2K6 914 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 PCDHA5Q9Y5H7 936 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 TTLL13PA6NNM8 815 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 EIF3DO15371 548 aaKnown RBP eCLIP17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 ZNF623O75123 536 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 PPP1R37O75864 691 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 UPP2O95045 317 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 PTMSP20962 102 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 IBSPP21815 317 aaPredicted RBP17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 LIG4P49917 911 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 UBXN11Q5T124 520 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 MAP4K3Q8IVH8 894 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 SYCP3Q8IZU3 236 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 ZNF507Q8TCN5 953 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 PGBD4Q96DM1 585 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 ZBED2Q9BTP6 218 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 GTPBP4Q9BZE4 634 aaKnown RBP17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 PDZD7Q9H5P4 517 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 TMEM161AQ9NX61 479 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 PCDHB2Q9Y5E7 798 aa17.07■□□□□ 0.32
SLC6A4-205ENST00000579221 TOM1L1O75674 476 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 PRPF6O94906 941 aaKnown RBP17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 NPTXRO95502 500 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 MBD3O95983 291 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 PIGRP01833 764 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 EDN1P05305 212 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 MATR3P43243 847 aaKnown RBP eCLIP17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 CASP5P51878 434 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 CAMK4Q16566 473 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 DCAF4L1Q3SXM0 396 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 MRPL10Q7Z7H8 261 aaKnown RBP17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 CDR2LQ86X02 465 aaPredicted RBP17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 HERC6Q8IVU3 1022 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 HACE1Q8IYU2 909 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 SPATA20Q8TB22 786 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 GPT2Q8TD30 523 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 EIF2AQ9BY44 585 aaKnown RBP17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 FGFBP2Q9BYJ0 223 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 CLSTN2Q9H4D0 955 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 PTPRHQ9HD43 1115 aa17.06■□□□□ 0.32
SLC6A4-205ENST00000579221 TNRC18O15417 2968 aaPredicted RBP17.05■□□□□ 0.32
SLC6A4-205ENST00000579221 TET1Q8NFU7 2136 aa17.05■□□□□ 0.32
SLC6A4-205ENST00000579221 CLDN3O15551 220 aa17.05■□□□□ 0.32
SLC6A4-205ENST00000579221 KIF20AO95235 890 aa17.05■□□□□ 0.32
SLC6A4-205ENST00000579221 STK4Q13043 487 aa17.05■□□□□ 0.32
SLC6A4-205ENST00000579221 EEF1DP3Q658K8 133 aa17.05■□□□□ 0.32
SLC6A4-205ENST00000579221 SLFN12LQ6IEE8 588 aa17.05■□□□□ 0.32
SLC6A4-205ENST00000579221 FAM117BQ6P1L5 589 aa17.05■□□□□ 0.32
SLC6A4-205ENST00000579221 MPZL3Q6UWV2 235 aa17.05■□□□□ 0.32
SLC6A4-205ENST00000579221 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
SLC6A4-205ENST00000579221 RNF169Q8NCN4 708 aa17.05■□□□□ 0.32
SLC6A4-205ENST00000579221 ERCC4Q92889 916 aaPredicted RBP17.05■□□□□ 0.32
SLC6A4-205ENST00000579221 UBN1Q9NPG3 1134 aa17.05■□□□□ 0.32
SLC6A4-205ENST00000579221 UBE4BO95155 1302 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 HNRNPDLO14979 420 aaKnown RBP17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 HOXA2O43364 376 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 GJB5O95377 273 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 MCF2P10911 925 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 ITGA4P13612 1032 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 PROZP22891 400 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 KCNA1Q09470 495 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 ZNF568Q3ZCX4 644 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 TMCO2Q7Z6W1 182 aaPredicted RBP17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 ZBTB33Q86T24 672 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 ZNF598Q86UK7 904 aaKnown RBP17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 CRIPAKQ8N1N5 446 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 GLIS3Q8NEA6 775 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 SCFD1Q8WVM8 642 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 ZBTB45Q96K62 511 aaPredicted RBP17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 RAD9AQ99638 391 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 NUP62CLQ9H1M0 184 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 KIAA1468Q9P260 1216 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 IPPQ9Y573 584 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 INSL6Q9Y581 213 aa17.04■□□□□ 0.32
SLC6A4-205ENST00000579221 GRXCR1A8MXD5 290 aa17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 ANKRD63C9JTQ0 380 aa17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 TLL1O43897 1013 aa17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 DGKIO75912 1065 aa17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 MCL1Q07820 350 aa17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 LRIT3Q3SXY7 679 aa17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 ZNF658Q5TYW1 1059 aaPredicted RBP17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 NELFCDQ8IXH7 590 aa17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 SMG8Q8ND04 991 aaKnown RBP17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 YME1L1Q96TA2 773 aa17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 CDT1Q9H211 546 aa17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 ANKFY1Q9P2R3 1169 aa17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 MSRAQ9UJ68 235 aa17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 PCDHA11Q9Y5I1 949 aa17.03■□□□□ 0.32
SLC6A4-205ENST00000579221 MYH11P35749 1972 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 RABGGTBP53611 331 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 SNRPFP62306 86 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms