RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ANKRD63C9JTQ0 380 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 SORBS3O60504 671 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 TLR2O60603 784 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 ERLIN1O75477 346 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 TADA3O75528 432 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 PLEKP08567 350 aaPredicted RBP12.05□□□□□ -0.48
SKA2-204ENST00000578519 ATP4AP20648 1035 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 TMOD1P28289 359 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 GCLMP48507 274 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 BPIFB4P59827 614 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 RBM10P98175 930 aaKnown RBP12.05□□□□□ -0.48
SKA2-204ENST00000578519 GFPT1Q06210 699 aaPredicted RBP12.05□□□□□ -0.48
SKA2-204ENST00000578519 CYP24A1Q07973 514 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 PSMD6Q15008 389 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 FAM110CQ1W6H9 321 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 KIAA0753Q2KHM9 967 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 EPC2Q52LR7 807 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 IQSEC1Q6DN90 963 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 ALKBH5Q6P6C2 394 aaKnown RBP12.05□□□□□ -0.48
SKA2-204ENST00000578519 CCDC62Q6P9F0 684 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 ARMCX2Q7L311 632 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 ANKRD13CQ8N6S4 541 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 FBXL13Q8NEE6 735 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 CAGE1Q8TC20 777 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 DHX38Q92620 1227 aaKnown RBP12.05□□□□□ -0.48
SKA2-204ENST00000578519 TAF4BQ92750 862 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 TMEM143Q96AN5 459 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 MS4A4AQ96JQ5 239 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 IRX2Q9BZI1 471 aaPredicted RBP12.05□□□□□ -0.48
SKA2-204ENST00000578519 EFCC1Q9HA90 598 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 UBE2TQ9NPD8 197 aaPredicted RBP12.05□□□□□ -0.48
SKA2-204ENST00000578519 TRPC6Q9Y210 931 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 COQ4Q9Y3A0 265 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 HYOU1Q9Y4L1 999 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 OTOFQ9HC10 1997 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 COL1A2P08123 1366 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 PTPRFP10586 1907 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 F8VZ95 297 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 SOCS7O14512 581 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 EVI5O60447 810 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 CYP2C8P10632 490 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 GLRA2P23416 452 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 ADORA2AP29274 412 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 GPC3P51654 580 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 CDC42EP1Q00587 391 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 PTK2Q05397 1052 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 POU5F1BQ06416 359 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 GRM1Q13255 1194 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 ENOX2Q16206 610 aaKnown RBP12.04□□□□□ -0.48
SKA2-204ENST00000578519 MAPK6Q16659 721 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 KYAT1Q16773 422 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 CBWD6Q4V339 395 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 CBWD3Q5JTY5 395 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 CBWD5Q5RIA9 395 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 CCDC181Q5TID7 509 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 DPY19L2P1Q6NXN4 242 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 PPP1R2P3Q6NXS1 205 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 MAMDC4Q6UXC1 1216 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 TRAPPC11Q7Z392 1133 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 APBB1IPQ7Z5R6 666 aaPredicted RBP12.04□□□□□ -0.48
SKA2-204ENST00000578519 BRI3BPQ8WY22 251 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 BSNDQ8WZ55 320 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 EMID1Q96A84 441 aaPredicted RBP12.04□□□□□ -0.48
SKA2-204ENST00000578519 PCYT2Q99447 389 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 LACRTQ9GZZ8 138 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 ABHD16BQ9H3Z7 469 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 RAB20Q9NX57 234 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 NAGPAQ9UK23 515 aa12.04□□□□□ -0.48
SKA2-204ENST00000578519 A0A087X0T9 212 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 GOLGA8IPA6NC78 632 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 GOLGA8JA6NMD2 632 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 TULP1O00294 542 aaPredicted RBP12.03□□□□□ -0.48
SKA2-204ENST00000578519 ZNF263O14978 683 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 CLDN3O15551 220 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 ATP8B1O43520 1251 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 PPFIA4O75335 1185 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 FAM228BP0C875 321 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 POTEJP0CG39 1038 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 ADSSP30520 456 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 NOP2P46087 812 aaKnown RBP12.03□□□□□ -0.48
SKA2-204ENST00000578519 FSTL1Q12841 308 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 KIF22Q14807 665 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 PLCB4Q15147 1175 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 ELF2Q15723 593 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 CLUL1Q15846 466 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 ARHGAP44Q17R89 818 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 TMEM132AQ24JP5 1023 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 ERCC6LQ2NKX8 1250 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 TEX35Q5T0J7 233 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 ZNF571Q7Z3V5 609 aaPredicted RBP12.03□□□□□ -0.48
SKA2-204ENST00000578519 CBWD2Q8IUF1 395 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 FBXO16Q8IX29 292 aaPredicted RBP12.03□□□□□ -0.48
SKA2-204ENST00000578519 PPTC7Q8NI37 304 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 ASAP3Q8TDY4 903 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 CTNNBL1Q8WYA6 563 aaPredicted RBP12.03□□□□□ -0.48
SKA2-204ENST00000578519 CCDC127Q96BQ5 260 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 SAAL1Q96ER3 474 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 FAM213AQ9BRX8 229 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 TCHPQ9BT92 498 aa12.03□□□□□ -0.48
SKA2-204ENST00000578519 MSTO1Q9BUK6 570 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms