RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 GOLGA8JA6NMD2 632 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 INHAP05111 366 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 EDN1P05305 212 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 ADRB2P07550 413 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 CYP2C9P11712 490 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 SKILP12757 684 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 KLK7P49862 253 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 GPC3P51654 580 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 C1QTNF8P60827 252 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 CXCL17Q6UXB2 119 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 CBWD2Q8IUF1 395 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 CCDC155Q8N6L0 562 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 PCSK9Q8NBP7 692 aaKnown RBP20.22■□□□□ 0.83
PRKCA-203ENST00000578063 NEK11Q8NG66 645 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 NLRP7Q8WX94 980 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 PRIMPOLQ96LW4 560 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 SCLT1Q96NL6 688 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 MMRN2Q9H8L6 949 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 ANKFY1Q9P2R3 1169 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 HDAC6Q9UBN7 1215 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 AGO2Q9UKV8 859 aaKnown RBP20.22■□□□□ 0.83
PRKCA-203ENST00000578063 LUC7L2Q9Y383 392 aaKnown RBP20.22■□□□□ 0.83
PRKCA-203ENST00000578063 A0A087WZ62 844 aa20.21■□□□□ 0.83
PRKCA-203ENST00000578063 A0A0B4J269 797 aa20.21■□□□□ 0.83
PRKCA-203ENST00000578063 TTC26A0AVF1 554 aa20.21■□□□□ 0.83
PRKCA-203ENST00000578063 N4BP1O75113 896 aaKnown RBP20.21■□□□□ 0.83
PRKCA-203ENST00000578063 GRK4P32298 578 aa20.21■□□□□ 0.83
PRKCA-203ENST00000578063 FMO5P49326 533 aa20.21■□□□□ 0.83
PRKCA-203ENST00000578063 GOLGA8FQ08AF8 430 aa20.21■□□□□ 0.83
PRKCA-203ENST00000578063 GOLGA8DPQ0D2H9 430 aa20.21■□□□□ 0.83
PRKCA-203ENST00000578063 KCNMA1Q12791 1236 aa20.21■□□□□ 0.83
PRKCA-203ENST00000578063 PRPF4BQ13523 1007 aaKnown RBP20.21■□□□□ 0.83
PRKCA-203ENST00000578063 ZSWIM2Q8NEG5 633 aa20.21■□□□□ 0.83
PRKCA-203ENST00000578063 ZNF668Q96K58 619 aaPredicted RBP20.21■□□□□ 0.83
PRKCA-203ENST00000578063 MFSD14AQ96MC6 490 aa20.21■□□□□ 0.83
PRKCA-203ENST00000578063 ACO2Q99798 780 aaKnown RBP20.21■□□□□ 0.83
PRKCA-203ENST00000578063 FDXACB1Q9BRP7 624 aaPredicted RBP20.21■□□□□ 0.83
PRKCA-203ENST00000578063 MSTO1Q9BUK6 570 aa20.21■□□□□ 0.83
PRKCA-203ENST00000578063 TMX1Q9H3N1 280 aa20.21■□□□□ 0.83
PRKCA-203ENST00000578063 TRIM17Q9Y577 477 aa20.21■□□□□ 0.83
PRKCA-203ENST00000578063 ZNF233A6NK53 670 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 CLDN3O15551 220 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 STX10O60499 249 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 TRIM49P0CI25 452 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 TRIM49CP0CI26 452 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 KRT9P35527 623 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 MATR3P43243 847 aaKnown RBP eCLIP20.2■□□□□ 0.822e-6■■■■□ 21.8
PRKCA-203ENST00000578063 EXOC3L4Q17RC7 722 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 GBP6Q6ZN66 633 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 TSHZ1Q6ZSZ6 1077 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 SRGAP1Q7Z6B7 1085 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 RNF180Q86T96 592 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 ZNF710Q8N1W2 664 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 TMC2Q8TDI7 906 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 EDEM3Q9BZQ6 932 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 FAM49AQ9H0Q0 323 aaPredicted RBP20.2■□□□□ 0.82
PRKCA-203ENST00000578063 FAM207AQ9NSI2 230 aaPredicted RBP20.2■□□□□ 0.82
PRKCA-203ENST00000578063 ABHD10Q9NUJ1 306 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 USP20Q9Y2K6 914 aa20.2■□□□□ 0.82
PRKCA-203ENST00000578063 NLRP11P59045 1033 aaKnown RBP20.19■□□□□ 0.82
PRKCA-203ENST00000578063 ZBED6P86452 979 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 CYP24A1Q07973 514 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 CCSAPQ6IQ19 270 aaPredicted RBP20.19■□□□□ 0.82
PRKCA-203ENST00000578063 ZNF397Q8NF99 534 aaPredicted RBP20.19■□□□□ 0.82
PRKCA-203ENST00000578063 BAG1Q99933 345 aaPredicted RBP20.19■□□□□ 0.82
PRKCA-203ENST00000578063 FAM213AQ9BRX8 229 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 LSM14BQ9BX40 385 aaKnown RBP20.19■□□□□ 0.82
PRKCA-203ENST00000578063 NAA15Q9BXJ9 866 aaKnown RBP20.19■□□□□ 0.82
PRKCA-203ENST00000578063 MINDY3Q9H8M7 445 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 HMX1Q9NP08 348 aaPredicted RBP20.19■□□□□ 0.82
PRKCA-203ENST00000578063 PYCARDQ9ULZ3 195 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 KAT6AQ92794 2004 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 P4HA2O15460 535 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 ASGR1P07306 291 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 MYL7Q01449 175 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 MCL1Q07820 350 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 HIC1Q14526 733 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 TMEM132AQ24JP5 1023 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 ATF7IP2Q5U623 682 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 TAF2Q6P1X5 1199 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 RUFY4Q6ZNE9 571 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 ZBTB45Q96K62 511 aaPredicted RBP20.19■□□□□ 0.82
PRKCA-203ENST00000578063 PPP1R16BQ96T49 567 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 CRACR2AQ9BSW2 395 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 HAPLN2Q9GZV7 340 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 PLCB1Q9NQ66 1216 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 GCNT4Q9P109 453 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 GTF2IRD1Q9UHL9 959 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 TNFSF13BQ9Y275 285 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 PTCH2Q9Y6C5 1203 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 CNTNAP2Q9UHC6 1331 aa20.19■□□□□ 0.82
PRKCA-203ENST00000578063 SCN10AQ9Y5Y9 1956 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 EVPLQ92817 2033 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 TREHO43280 583 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 PROZP22891 400 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 KCNJ6P48051 423 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 CETN1Q12798 172 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 NOLC1Q14978 699 aaKnown RBP eCLIP20.18■□□□□ 0.82
PRKCA-203ENST00000578063 PCBP1Q15365 356 aaKnown RBP eCLIP20.18■□□□□ 0.82
PRKCA-203ENST00000578063 KCNA10Q16322 511 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms