RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TRIM11Q96F44 468 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 PGBD1Q96JS3 809 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 TMEM87BQ96K49 555 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 TGS1Q96RS0 853 aaKnown RBP7.13□□□□□ -1.27
NUP88-212ENST00000576708 DUSP9Q99956 384 aaKnown RBP7.13□□□□□ -1.27
NUP88-212ENST00000576708 LZTS2Q9BRK4 669 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 USP26Q9BXU7 913 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 PSTPIP2Q9H939 334 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 LIN7BQ9HAP6 207 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 SEC63Q9UGP8 760 aaKnown RBP7.13□□□□□ -1.27
NUP88-212ENST00000576708 ADAMTS3O15072 1205 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 STAM2O75886 525 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 CHRNA1P02708 482 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 AMHP03971 560 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 NID1P14543 1247 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 CPA1P15085 419 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 SMARCA1P28370 1054 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 LIFRP42702 1097 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 GNAQP50148 359 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 IGBP1P78318 339 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 HTRA4P83105 476 aaPredicted RBP7.12□□□□□ -1.27
NUP88-212ENST00000576708 GRM2Q14416 872 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 COL19A1Q14993 1142 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 SPRED3Q2MJR0 410 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 ADCK5Q3MIX3 580 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 WWC2Q6AWC2 1192 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 ALG1LQ6GMV1 187 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 TXNDC11Q6PKC3 985 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 TMTC3Q6ZXV5 915 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 HEATR3Q7Z4Q2 680 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 TMTC2Q8N394 836 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 IL22RA1Q8N6P7 574 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 TMEM102Q8N9M5 508 aaPredicted RBP7.12□□□□□ -1.27
NUP88-212ENST00000576708 FANCBQ8NB91 859 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 CYP2W1Q8TAV3 490 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 SEPT8Q92599 483 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 TTC9Q92623 222 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 UIMC1Q96RL1 719 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 TCF12Q99081 682 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 SENP7Q9BQF6 1050 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 SUV39H2Q9H5I1 410 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 TMEM260Q9NX78 707 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 MKL2Q9ULH7 1088 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 PCDHA6Q9UN73 950 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 PCDHA8Q9Y5H6 950 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 UBIAD1Q9Y5Z9 338 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 SLC12A7Q9Y666 1083 aa7.12□□□□□ -1.27
NUP88-212ENST00000576708 PRRC2BQ5JSZ5 2229 aaKnown RBP7.12□□□□□ -1.27
NUP88-212ENST00000576708 EMSYQ7Z589 1322 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 SPDYE3A6NKU9 549 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 EFCAB14O75071 495 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 PRPF40AO75400 957 aaKnown RBP7.11□□□□□ -1.27
NUP88-212ENST00000576708 CALM1P0DP23 149 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 CALM2P0DP24 149 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 CALM3P0DP25 149 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 ARP10275 920 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 GHRP10912 638 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 GNAT1P11488 350 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 GRIA4P48058 902 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 EXOSC10Q01780 885 aaKnown RBP7.11□□□□□ -1.27
NUP88-212ENST00000576708 MGAT3Q09327 533 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 PPFIA1Q13136 1202 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 MTMR1Q13613 665 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 GRIK4Q16099 956 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 MARCH8Q5T0T0 291 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 KIAA0319Q5VV43 1072 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 XRRA1Q6P2D8 792 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 NXPE4Q6UWF7 544 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 WFDC8Q8IUA0 241 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 FBF1Q8TES7 1133 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 TRAPPC12Q8WVT3 735 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 DNAJB3Q8WWF6 145 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 SEPT1Q8WYJ6 367 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 GLG1Q92896 1179 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 TOP1MTQ969P6 601 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 GPRASP2Q96D09 838 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 NEK1Q96PY6 1258 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 YME1L1Q96TA2 773 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 PCYT2Q99447 389 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 MTA3Q9BTC8 594 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 PLVAPQ9BX97 442 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 BCO2Q9BYV7 579 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 CD320Q9NPF0 282 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 JADE2Q9NQC1 790 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 ZNF215Q9UL58 517 aaPredicted RBP7.11□□□□□ -1.27
NUP88-212ENST00000576708 COG5Q9UP83 839 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 INSL6Q9Y581 213 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 TRANK1O15050 2925 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 XIRP2A4UGR9 3374 aa7.11□□□□□ -1.27
NUP88-212ENST00000576708 NRCAMQ92823 1304 aa7.1□□□□□ -1.27
NUP88-212ENST00000576708 FAM229AH3BQW9 127 aa7.1□□□□□ -1.27
NUP88-212ENST00000576708 DDX39AO00148 427 aaKnown RBP7.1□□□□□ -1.27
NUP88-212ENST00000576708 STXBP3O00186 592 aa7.1□□□□□ -1.27
NUP88-212ENST00000576708 CSPG5O95196 566 aa7.1□□□□□ -1.27
NUP88-212ENST00000576708 EPHA1P21709 976 aa7.1□□□□□ -1.27
NUP88-212ENST00000576708 CDC27P30260 824 aa7.1□□□□□ -1.27
NUP88-212ENST00000576708 NAPAP54920 295 aa7.1□□□□□ -1.27
NUP88-212ENST00000576708 TMEM62Q0P6H9 643 aa7.1□□□□□ -1.27
NUP88-212ENST00000576708 GPM6BQ13491 265 aa7.1□□□□□ -1.27
NUP88-212ENST00000576708 LPIN1Q14693 890 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms