RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 COL6A1P12109 1028 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 FGFR4P22455 802 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 EEF1GP26641 437 aaKnown RBP18.02■□□□□ 0.48
ERCC4-208ENST00000576348 MNX1P50219 401 aaPredicted RBP18.02■□□□□ 0.48
ERCC4-208ENST00000576348 ZNF568Q3ZCX4 644 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 TRIM60Q495X7 471 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 CDKAL1Q5VV42 579 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 LRRC55Q6ZSA7 311 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 FILIP1Q7Z7B0 1213 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 ZBTB33Q86T24 672 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 SLC9A9Q8IVB4 645 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 C12orf56Q8IXR9 622 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 XXYLT1Q8NBI6 393 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 DHX38Q92620 1227 aaKnown RBP18.02■□□□□ 0.48
ERCC4-208ENST00000576348 CNOT6LQ96LI5 555 aaKnown RBP18.02■□□□□ 0.48
ERCC4-208ENST00000576348 CTAGE1Q96RT6 745 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 ADPGKQ9BRR6 497 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 CBWD1Q9BRT8 395 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 HSPBP1Q9NZL4 362 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 USP20Q9Y2K6 914 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 PCNTO95613 3336 aa18.02■□□□□ 0.48
ERCC4-208ENST00000576348 PES1O00541 588 aaKnown RBP18.01■□□□□ 0.47
ERCC4-208ENST00000576348 B4GALT5O43286 388 aa18.01■□□□□ 0.47
ERCC4-208ENST00000576348 TSPAN1O60635 241 aa18.01■□□□□ 0.47
ERCC4-208ENST00000576348 RPS6KA5O75582 802 aa18.01■□□□□ 0.47
ERCC4-208ENST00000576348 TPM3P06753 285 aa18.01■□□□□ 0.47
ERCC4-208ENST00000576348 KRT13P13646 458 aa18.01■□□□□ 0.47
ERCC4-208ENST00000576348 PSMC2P35998 433 aaKnown RBP18.01■□□□□ 0.47
ERCC4-208ENST00000576348 TLE2Q04725 743 aa18.01■□□□□ 0.47
ERCC4-208ENST00000576348 TRIM71Q2Q1W2 868 aaKnown RBP18.01■□□□□ 0.47
ERCC4-208ENST00000576348 FILIP1LQ4L180 1135 aa18.01■□□□□ 0.47
ERCC4-208ENST00000576348 SLC39A4Q6P5W5 647 aa18.01■□□□□ 0.47
ERCC4-208ENST00000576348 NOTUMQ6P988 496 aa18.01■□□□□ 0.47
ERCC4-208ENST00000576348 MPZL3Q6UWV2 235 aa18.01■□□□□ 0.47
ERCC4-208ENST00000576348 TSHZ1Q6ZSZ6 1077 aa18.01■□□□□ 0.47
ERCC4-208ENST00000576348 FAM186BQ8IYM0 893 aa18.01■□□□□ 0.47
ERCC4-208ENST00000576348 AGO2Q9UKV8 859 aaKnown RBP18.01■□□□□ 0.47
ERCC4-208ENST00000576348 TNFSF13BQ9Y275 285 aa18.01■□□□□ 0.47
ERCC4-208ENST00000576348 FRMPD3Q5JV73 1810 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 GOLGA8IPA6NC78 632 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 GOLGA8JA6NMD2 632 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 GPR182O15218 404 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 CBFA2T2O43439 604 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 CHRNA1P02708 482 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 CKBP12277 381 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 ATP1A3P13637 1013 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 ZNF18P17022 549 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 AXLP30530 894 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 FANCCQ00597 558 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 PAK2Q13177 524 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 NOLC1Q14978 699 aaKnown RBP eCLIP18■□□□□ 0.47
ERCC4-208ENST00000576348 TCP11X2Q5H9J9 407 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 ZNF618Q5T7W0 954 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 ANKRD33Q7Z3H0 272 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 ZC3H3Q8IXZ2 948 aaKnown RBP18■□□□□ 0.47
ERCC4-208ENST00000576348 SAAL1Q96ER3 474 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 CPB2Q96IY4 423 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 TOX2Q96NM4 488 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 MKNK1Q9BUB5 465 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 TRIM5Q9C035 493 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 METTL14Q9HCE5 456 aaKnown RBP18■□□□□ 0.47
ERCC4-208ENST00000576348 KIAA1586Q9HCI6 787 aa18■□□□□ 0.47
ERCC4-208ENST00000576348 ARMCX3Q9UH62 379 aaPredicted RBP18■□□□□ 0.47
ERCC4-208ENST00000576348 PIN4Q9Y237 131 aaKnown RBP18■□□□□ 0.47
ERCC4-208ENST00000576348 NOC2LQ9Y3T9 749 aaKnown RBP18■□□□□ 0.47
ERCC4-208ENST00000576348 A0A0B4J269 797 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 LDHAP00338 332 aaKnown RBP17.99■□□□□ 0.47
ERCC4-208ENST00000576348 CD4P01730 458 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 EDN1P05305 212 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 IQCF3P0C7M6 154 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 GHRP10912 638 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 PRKCSHP14314 528 aaPredicted RBP17.99■□□□□ 0.47
ERCC4-208ENST00000576348 SELPP16109 830 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 ARF4P18085 180 aaPredicted RBP17.99■□□□□ 0.47
ERCC4-208ENST00000576348 ADSSP30520 456 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 MGAT3Q09327 533 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 NFX1Q12986 1120 aaKnown RBP17.99■□□□□ 0.47
ERCC4-208ENST00000576348 AMHR2Q16671 573 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 FAM26DQ5JW98 314 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 C1orf53Q5VUE5 145 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 FRMD5Q7Z6J6 570 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 GPD1LQ8N335 351 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 USP38Q8NB14 1042 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 RDH13Q8NBN7 331 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 TMEM40Q8WWA1 233 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 ZBTB45Q96K62 511 aaPredicted RBP17.99■□□□□ 0.47
ERCC4-208ENST00000576348 FAM213AQ9BRX8 229 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 DMAC2Q9NW81 257 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 TAB2Q9NYJ8 693 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 STYXL1Q9Y6J8 313 aa17.99■□□□□ 0.47
ERCC4-208ENST00000576348 HTTP42858 3142 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 EXTL3O43909 919 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 AKAP3O75969 853 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 MCF2P10911 925 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 EN2P19622 333 aaPredicted RBP17.98■□□□□ 0.47
ERCC4-208ENST00000576348 MCL1Q07820 350 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 KRT31Q15323 416 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 KYAT1Q16773 422 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 DCAF4L1Q3SXM0 396 aa17.98■□□□□ 0.47
ERCC4-208ENST00000576348 TCERG1LQ5VWI1 586 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms