RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 C15orf39Q6ZRI6 1047 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 OTOP3Q7RTS5 596 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 WASF1Q92558 559 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 ATOH1Q92858 354 aaPredicted RBP11.64□□□□□ -0.55
TVP23B-208ENST00000575261 DYDC2Q96IM9 177 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 CCDC43Q96MW1 224 aaKnown RBP11.64□□□□□ -0.55
TVP23B-208ENST00000575261 KLHL5Q96PQ7 755 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 SMOC2Q9H3U7 446 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 GJB4Q9NTQ9 266 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 MARCH5Q9NX47 278 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 ORC3Q9UBD5 711 aaPredicted RBP11.64□□□□□ -0.55
TVP23B-208ENST00000575261 LIMD1Q9UGP4 676 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 SSX2IPQ9Y2D8 614 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 PRG3Q9Y2Y8 225 aaPredicted RBP11.64□□□□□ -0.55
TVP23B-208ENST00000575261 IPPQ9Y573 584 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 MYO10Q9HD67 2058 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 WDR87Q6ZQQ6 2873 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 TDRD15B5MCY1 1934 aaKnown RBP11.63□□□□□ -0.55
TVP23B-208ENST00000575261 INPPL1O15357 1258 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 ST18O60284 1047 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 TSPAN1O60635 241 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 LILRB3O75022 631 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 ADH1AP07327 375 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 ITGA4P13612 1032 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 MLH1P40692 756 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 AK2P54819 239 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 PTENP60484 403 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 TFDP1Q14186 410 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 ANKRD1Q15327 319 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 HACE1Q8IYU2 909 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 SMG8Q8ND04 991 aaKnown RBP11.63□□□□□ -0.55
TVP23B-208ENST00000575261 RPS6KC1Q96S38 1066 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 HERC2P3Q9BVR0 1158 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 TRIM6Q9C030 488 aaPredicted RBP11.63□□□□□ -0.55
TVP23B-208ENST00000575261 MFSD1Q9H3U5 465 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 XPNPEP1Q9NQW7 623 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 MAN1C1Q9NR34 630 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 DPP7Q9UHL4 492 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 TPCN1Q9ULQ1 816 aa11.63□□□□□ -0.55
TVP23B-208ENST00000575261 PLXNA3P51805 1871 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 FAM205CA6NFA0 338 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 ARL5CA6NH57 179 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 H0Y858 1186 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 INO80B-WBP1J3KQ70 363 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 C2CD2LO14523 706 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 GFRA3O60609 400 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 NR1I2O75469 434 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 DGAT1O75907 488 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 GLUD1P00367 558 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 OR1G1P47890 313 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 GLUD2P49448 558 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 ANAPC15P60006 121 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 POU5F1BQ06416 359 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 DSC1Q08554 894 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 NR5A1Q13285 461 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 EARS2Q5JPH6 523 aaKnown RBP11.62□□□□□ -0.55
TVP23B-208ENST00000575261 ASTLQ6HA08 431 aaPredicted RBP11.62□□□□□ -0.55
TVP23B-208ENST00000575261 IFNLR1Q8IU57 520 aaPredicted RBP11.62□□□□□ -0.55
TVP23B-208ENST00000575261 TPH2Q8IWU9 490 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 COLGALT2Q8IYK4 626 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 TMEM105Q8N8V8 129 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 CMASQ8NFW8 434 aaPredicted RBP11.62□□□□□ -0.55
TVP23B-208ENST00000575261 CPB2Q96IY4 423 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 GAD1Q99259 594 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 EIF2AK1Q9BQI3 630 aaKnown RBP11.62□□□□□ -0.55
TVP23B-208ENST00000575261 EIF2AQ9BY44 585 aaKnown RBP11.62□□□□□ -0.55
TVP23B-208ENST00000575261 NFKBIZQ9BYH8 718 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 CSRNP2Q9H175 543 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 PCDHA12Q9UN75 941 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 ZMYM2Q9UBW7 1377 aa11.62□□□□□ -0.55
TVP23B-208ENST00000575261 ZBTB39O15060 712 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 TEX28O15482 410 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 NEMFO60524 1076 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 SLITRK3O94933 977 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 LYPLA2O95372 231 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 CTDNEP1O95476 244 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 SCNN1GP51170 649 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 CLCN5P51795 746 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 MBTD1Q05BQ5 628 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 TDGQ13569 410 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 CAPSQ13938 189 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 CALCRLQ16602 461 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 CYP26C1Q6V0L0 522 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 RNF168Q8IYW5 571 aaPredicted RBP11.61□□□□□ -0.55
TVP23B-208ENST00000575261 FEZF2Q8TBJ5 459 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 STAMQ92783 540 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 TNFRSF25Q93038 417 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 ZFP42Q96MM3 310 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 RHOBTB2Q9BYZ6 727 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 NXF3Q9H4D5 531 aaKnown RBP11.61□□□□□ -0.55
TVP23B-208ENST00000575261 ANKEF1Q9NU02 776 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 DUSP12Q9UNI6 340 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 GIT1Q9Y2X7 761 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 HES2Q9Y543 173 aa11.61□□□□□ -0.55
TVP23B-208ENST00000575261 PROB1E7EW31 1015 aa11.6□□□□□ -0.55
TVP23B-208ENST00000575261 DTNBO60941 627 aa11.6□□□□□ -0.55
TVP23B-208ENST00000575261 ARF4P18085 180 aaPredicted RBP11.6□□□□□ -0.55
TVP23B-208ENST00000575261 ARL2P36404 184 aa11.6□□□□□ -0.55
TVP23B-208ENST00000575261 RARRES1P49788 294 aa11.6□□□□□ -0.55
TVP23B-208ENST00000575261 DSG1Q02413 1049 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms