RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 CLCN4P51793 760 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 AK2P54819 239 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 TRIM29Q14134 588 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 CALCRLQ16602 461 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 UBXN11Q5T124 520 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 OTOP3Q7RTS5 596 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 GPR149Q86SP6 731 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 PHOX2BQ99453 314 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 EIF2AK1Q9BQI3 630 aaKnown RBP13.56□□□□□ -0.24
CCDC40-210ENST00000573903 HERC2P3Q9BVR0 1158 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 VN1R3Q9BXE9 311 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 GJB4Q9NTQ9 266 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 LIMD1Q9UGP4 676 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 PCDHA12Q9UN75 941 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 PRG3Q9Y2Y8 225 aaPredicted RBP13.56□□□□□ -0.24
CCDC40-210ENST00000573903 IPPQ9Y573 584 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 MYO10Q9HD67 2058 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 TRIOO75962 3097 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 B4GALT3O60512 393 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 TSPAN1O60635 241 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 DGAT1O75907 488 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 PDGFBP01127 241 aaPredicted RBP13.55□□□□□ -0.24
CCDC40-210ENST00000573903 CNPP09543 421 aaKnown RBP13.55□□□□□ -0.24
CCDC40-210ENST00000573903 MLH1P40692 756 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 PTENP60484 403 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 SPIRE1Q08AE8 756 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 NR5A1Q13285 461 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 KANK3Q6NY19 840 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 C15orf39Q6ZRI6 1047 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 CPB2Q96IY4 423 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 APOL6Q9BWW8 343 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 CSRNP2Q9H175 543 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 UPF2Q9HAU5 1272 aaKnown RBP13.55□□□□□ -0.24
CCDC40-210ENST00000573903 ANKEF1Q9NU02 776 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 FAM86C1Q9NVL1 165 aa13.55□□□□□ -0.24
CCDC40-210ENST00000573903 C2orf16Q68DN1 1984 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 ARL5CA6NH57 179 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 GALR2O43603 387 aaPredicted RBP13.54□□□□□ -0.24
CCDC40-210ENST00000573903 ST18O60284 1047 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 NEMFO60524 1076 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 SLITRK3O94933 977 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 SEC24BO95487 1268 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 GLUD1P00367 558 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 GLUD2P49448 558 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 AFF1P51825 1210 aaKnown RBP13.54□□□□□ -0.24
CCDC40-210ENST00000573903 POU5F1BQ06416 359 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 EARS2Q5JPH6 523 aaKnown RBP13.54□□□□□ -0.24
CCDC40-210ENST00000573903 COLGALT2Q8IYK4 626 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 SMG8Q8ND04 991 aaKnown RBP13.54□□□□□ -0.24
CCDC40-210ENST00000573903 STAMQ92783 540 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 RPS6KC1Q96S38 1066 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 GAD1Q99259 594 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 COLEC11Q9BWP8 271 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 EIF2AQ9BY44 585 aaKnown RBP13.54□□□□□ -0.24
CCDC40-210ENST00000573903 TTC12Q9H892 705 aaPredicted RBP13.54□□□□□ -0.24
CCDC40-210ENST00000573903 MAN1C1Q9NR34 630 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 GIT1Q9Y2X7 761 aa13.54□□□□□ -0.24
CCDC40-210ENST00000573903 ZDBF2Q9HCK1 2354 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 PLXNA3P51805 1871 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 FAM205CA6NFA0 338 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 H0Y858 1186 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 ZBTB39O15060 712 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 GFRA3O60609 400 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 LYPLA2O95372 231 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 CTDNEP1O95476 244 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 TXKP42681 527 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 SCNN1GP51170 649 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 CAPSQ13938 189 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 ASTLQ6HA08 431 aaPredicted RBP13.53□□□□□ -0.24
CCDC40-210ENST00000573903 CYP26C1Q6V0L0 522 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
CCDC40-210ENST00000573903 GTF3C6Q969F1 213 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 NFKBIZQ9BYH8 718 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 SMOC2Q9H3U7 446 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 XPNPEP1Q9NQW7 623 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 MARCH5Q9NX47 278 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 FBXL21Q9UKT6 434 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 HES2Q9Y543 173 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 GTF3C3Q9Y5Q9 886 aa13.53□□□□□ -0.24
CCDC40-210ENST00000573903 LRRIQ4A6NIV6 560 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 INPPL1O15357 1258 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 USO1O60763 962 aaKnown RBP13.52□□□□□ -0.25
CCDC40-210ENST00000573903 DTNBO60941 627 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 LILRB3O75022 631 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 ARF4P18085 180 aaPredicted RBP13.52□□□□□ -0.25
CCDC40-210ENST00000573903 GBP2P32456 591 aaPredicted RBP13.52□□□□□ -0.25
CCDC40-210ENST00000573903 RARRES1P49788 294 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 CREMQ03060 361 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 MBTD1Q05BQ5 628 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 DSC1Q08554 894 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 GRIK3Q13003 919 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 TDGQ13569 410 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 TMEM132AQ24JP5 1023 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 SLC27A1Q6PCB7 646 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 ZBTB8OSQ8IWT0 167 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 DIS3L2Q8IYB7 885 aaKnown RBP13.52□□□□□ -0.25
CCDC40-210ENST00000573903 NECAB1Q8N987 351 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 FLCNQ8NFG4 579 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 CMASQ8NFW8 434 aaPredicted RBP13.52□□□□□ -0.25
CCDC40-210ENST00000573903 ASAP3Q8TDY4 903 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms