RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 ITGA4P13612 1032 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 FSHRP23945 695 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 GNA11P29992 359 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 CIITAP33076 1130 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 ADD1P35611 737 aaKnown RBP13.66□□□□□ -0.22
PRPF8-208ENST00000573716 GPC5P78333 572 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 NECTIN1Q15223 517 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 PLA2G4FQ68DD2 849 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 MAML2Q8IZL2 1156 aaPredicted RBP13.66□□□□□ -0.22
PRPF8-208ENST00000573716 SLC5A5Q92911 643 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 RPP25Q9BUL9 199 aaKnown RBP13.66□□□□□ -0.22
PRPF8-208ENST00000573716 APOL6Q9BWW8 343 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 NIFKQ9BYG3 293 aaKnown RBP13.66□□□□□ -0.22
PRPF8-208ENST00000573716 FAM217BQ9NTX9 383 aaPredicted RBP13.66□□□□□ -0.22
PRPF8-208ENST00000573716 USP18Q9UMW8 372 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 PATJQ8NI35 1801 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 DOCK6Q96HP0 2047 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 IGKV6-21A0A0C4DH24 114 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 KANSL1LA0AUZ9 987 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 DCDC2BA2VCK2 349 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 ANHXE9PGG2 379 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 SPTLC1O15269 473 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 NR1I2O75469 434 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 RPL17P18621 184 aaKnown RBP13.65□□□□□ -0.22
PRPF8-208ENST00000573716 SDHBP21912 280 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 ATXN1P54253 815 aaKnown RBP13.65□□□□□ -0.22
PRPF8-208ENST00000573716 RNF20Q5VTR2 975 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 KIAA0319Q5VV43 1072 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 PARM1Q6UWI2 310 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 MRPL10Q7Z7H8 261 aaKnown RBP13.65□□□□□ -0.22
PRPF8-208ENST00000573716 COLGALT2Q8IYK4 626 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 BICD2Q8TD16 824 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 ESYT1Q9BSJ8 1104 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 RHOBTB2Q9BYZ6 727 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 PRKD2Q9BZL6 878 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 PLEKHA4Q9H4M7 779 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 RXFP1Q9HBX9 757 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 BMP2KQ9NSY1 1161 aaPredicted RBP13.65□□□□□ -0.22
PRPF8-208ENST00000573716 SMG5Q9UPR3 1016 aaKnown RBP13.65□□□□□ -0.22
PRPF8-208ENST00000573716 COL4A3BPQ9Y5P4 624 aa13.65□□□□□ -0.22
PRPF8-208ENST00000573716 FAM170BA6NMN3 283 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 TGM5O43548 720 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 MAFO75444 373 aaPredicted RBP13.64□□□□□ -0.23
PRPF8-208ENST00000573716 CD72P21854 359 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 MLH1P40692 756 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 SCNN1GP51170 649 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 STARD6P59095 220 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 AKAP17AQ02040 695 aaKnown RBP13.64□□□□□ -0.23
PRPF8-208ENST00000573716 DSG1Q02413 1049 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 MLF2Q15773 248 aaPredicted RBP13.64□□□□□ -0.23
PRPF8-208ENST00000573716 ST3GAL2Q16842 350 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 UBXN11Q5T124 520 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 DHX32Q7L7V1 743 aaKnown RBP13.64□□□□□ -0.23
PRPF8-208ENST00000573716 GRASPQ7Z6J2 395 aaPredicted RBP13.64□□□□□ -0.23
PRPF8-208ENST00000573716 GPR161Q8N6U8 529 aaKnown RBP13.64□□□□□ -0.23
PRPF8-208ENST00000573716 HDAC7Q8WUI4 952 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 FGF14Q92915 247 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 TMEM143Q96AN5 459 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 CEP89Q96ST8 783 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 GAD1Q99259 594 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 JPH2Q9BR39 696 aaPredicted RBP13.64□□□□□ -0.23
PRPF8-208ENST00000573716 COLEC11Q9BWP8 271 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 MINDY3Q9H8M7 445 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 IFT122Q9HBG6 1241 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 ZDHHC7Q9NXF8 308 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 POLIQ9UNA4 740 aa13.64□□□□□ -0.23
PRPF8-208ENST00000573716 MTF2Q9Y483 593 aaPredicted RBP13.64□□□□□ -0.23
PRPF8-208ENST00000573716 MAP1BP46821 2468 aaKnown RBP13.64□□□□□ -0.23
PRPF8-208ENST00000573716 CCDC196A0A1B0GTZ2 297 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 ARL5CA6NH57 179 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 ERLIN2O94905 339 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 STBD1O95210 358 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 NCLP19338 710 aaKnown RBP13.63□□□□□ -0.23
PRPF8-208ENST00000573716 NPEPPSP55786 919 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 NTHL1P78549 312 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 EXOSC10Q01780 885 aaKnown RBP13.63□□□□□ -0.23
PRPF8-208ENST00000573716 LMNB2Q03252 620 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 ZNF528Q3MIS6 628 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 ANO5Q75V66 913 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 RDM1Q8NG50 284 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 PRPF31Q8WWY3 499 aaKnown RBP13.63□□□□□ -0.23
PRPF8-208ENST00000573716 SLC7A3Q8WY07 619 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 RABGGTAQ92696 567 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 ZFP42Q96MM3 310 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 KXD1Q9BQD3 176 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 UBN1Q9NPG3 1134 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 FBXO4Q9UKT5 387 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 HES2Q9Y543 173 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 PCDHGA2Q9Y5H1 932 aa13.63□□□□□ -0.23
PRPF8-208ENST00000573716 PRR5-ARHGAP8B1AHC4 643 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 ZMYND10O75800 440 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 PSMD10O75832 226 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 HOXA11P31270 313 aaPredicted RBP13.62□□□□□ -0.23
PRPF8-208ENST00000573716 USP11P51784 963 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 ARHGAP8P85298 464 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 LAMTOR4Q0VGL1 99 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 USP41Q3LFD5 358 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 SLC44A4Q53GD3 710 aa13.62□□□□□ -0.23
PRPF8-208ENST00000573716 FUT10Q6P4F1 479 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms