RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 KBTBD13C9JR72 458 aa14.93□□□□□ -0.02
CCDC40-209ENST00000573474 TOM1L1O75674 476 aa14.93□□□□□ -0.02
CCDC40-209ENST00000573474 LDHAP00338 332 aaKnown RBP14.93□□□□□ -0.02
CCDC40-209ENST00000573474 EDN1P05305 212 aa14.93□□□□□ -0.02
CCDC40-209ENST00000573474 MATR3P43243 847 aaKnown RBP eCLIP14.93□□□□□ -0.02
CCDC40-209ENST00000573474 CTCFP49711 727 aaPredicted RBP14.93□□□□□ -0.02
CCDC40-209ENST00000573474 PCBP1Q15365 356 aaKnown RBP eCLIP14.93□□□□□ -0.02
CCDC40-209ENST00000573474 MTFR1Q15390 333 aa14.93□□□□□ -0.02
CCDC40-209ENST00000573474 KIZQ2M2Z5 673 aa14.93□□□□□ -0.02
CCDC40-209ENST00000573474 TSHZ1Q6ZSZ6 1077 aa14.93□□□□□ -0.02
CCDC40-209ENST00000573474 INTS8Q75QN2 995 aaKnown RBP14.93□□□□□ -0.02
CCDC40-209ENST00000573474 RSPH3Q86UC2 560 aa14.93□□□□□ -0.02
CCDC40-209ENST00000573474 GPD1LQ8N335 351 aa14.93□□□□□ -0.02
CCDC40-209ENST00000573474 RDH13Q8NBN7 331 aa14.93□□□□□ -0.02
CCDC40-209ENST00000573474 AGO2Q9UKV8 859 aaKnown RBP14.93□□□□□ -0.02
CCDC40-209ENST00000573474 PHF24Q9UPV7 400 aa14.93□□□□□ -0.02
CCDC40-209ENST00000573474 USP20Q9Y2K6 914 aa14.93□□□□□ -0.02
CCDC40-209ENST00000573474 SIP14410 1827 aa14.93□□□□□ -0.02
CCDC40-209ENST00000573474 PCNTO95613 3336 aa14.93□□□□□ -0.02
CCDC40-209ENST00000573474 ITIH6Q6UXX5 1313 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 GOLGA8IPA6NC78 632 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 GOLGA8JA6NMD2 632 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 CLDN3O15551 220 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 EXTL3O43909 919 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 AFPP02771 609 aaKnown RBP14.92□□□□□ -0.02
CCDC40-209ENST00000573474 IQCF3P0C7M6 154 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 MCCD1P59942 119 aaPredicted RBP14.92□□□□□ -0.02
CCDC40-209ENST00000573474 ENPEPQ07075 957 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 TMEM62Q0P6H9 643 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 KCNH2Q12809 1159 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 PKN2Q16513 984 aaKnown RBP14.92□□□□□ -0.02
CCDC40-209ENST00000573474 SNRNP35Q16560 246 aaKnown RBP14.92□□□□□ -0.02
CCDC40-209ENST00000573474 AMHR2Q16671 573 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 TMEM132AQ24JP5 1023 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 ATF7IP2Q5U623 682 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 FBXO46Q6PJ61 603 aaPredicted RBP14.92□□□□□ -0.02
CCDC40-209ENST00000573474 CCDC186Q7Z3E2 898 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 RPAINQ86UA6 219 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 SERINC5Q86VE9 423 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 ZSWIM2Q8NEG5 633 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 SAAL1Q96ER3 474 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 ZBTB45Q96K62 511 aaPredicted RBP14.92□□□□□ -0.02
CCDC40-209ENST00000573474 MFSD14AQ96MC6 490 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 DEFB118Q96PH6 123 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 ERGIC2Q96RQ1 377 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 TCHPQ9BT92 498 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 MSTO1Q9BUK6 570 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 SEZ6LQ9BYH1 1024 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 RNF208Q9H0X6 261 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 TNFSF13BQ9Y275 285 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.92□□□□□ -0.02
CCDC40-209ENST00000573474 CNTNAP2Q9UHC6 1331 aa14.92□□□□□ -0.02
CCDC40-209ENST00000573474 A0A0U1RQG5 324 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-209ENST00000573474 A0A1W2PQ45 241 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-209ENST00000573474 A0A1W2PQY0 241 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 ZNF233A6NK53 670 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 TTLL13PA6NNM8 815 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 DNM1LO00429 736 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 B4GALT5O43286 388 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 DARSP14868 501 aaKnown RBP14.91□□□□□ -0.02
CCDC40-209ENST00000573474 PROZP22891 400 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 VAMP7P51809 220 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 CRYBB1P53674 252 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-209ENST00000573474 GSDMDP57764 484 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 MCL1Q07820 350 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 NCBP1Q09161 790 aaKnown RBP14.91□□□□□ -0.02
CCDC40-209ENST00000573474 BFSP1Q12934 665 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 TBX2Q13207 712 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-209ENST00000573474 PTGISQ16647 500 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 PTPN21Q16825 1174 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 HS1BP3Q53T59 392 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 DCAF17Q5H9S7 520 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-209ENST00000573474 TCERG1LQ5VWI1 586 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 MPZL3Q6UWV2 235 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 PPFIBP1Q86W92 1011 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 CBWD2Q8IUF1 395 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 SLC43A3Q8NBI5 491 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 SLC35C1Q96A29 364 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 TRIM44Q96DX7 344 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-209ENST00000573474 FAM213AQ9BRX8 229 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 HAPLN2Q9GZV7 340 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 CDHR5Q9HBB8 845 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 PTPRHQ9HD43 1115 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 ANKFY1Q9P2R3 1169 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 OGDHLQ9ULD0 1010 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 GINS2Q9Y248 185 aa14.91□□□□□ -0.02
CCDC40-209ENST00000573474 M0QZ92 97 aa14.9□□□□□ -0.02
CCDC40-209ENST00000573474 ABLIM1O14639 778 aa14.9□□□□□ -0.02
CCDC40-209ENST00000573474 CSDE1O75534 798 aaKnown RBP14.9□□□□□ -0.02
CCDC40-209ENST00000573474 ERLIN2O94905 339 aa14.9□□□□□ -0.02
CCDC40-209ENST00000573474 MYCP01106 439 aaPredicted RBP14.9□□□□□ -0.02
CCDC40-209ENST00000573474 ADRB2P07550 413 aa14.9□□□□□ -0.02
CCDC40-209ENST00000573474 EIF4BP23588 611 aaKnown RBP14.9□□□□□ -0.02
CCDC40-209ENST00000573474 LBX1P52954 281 aa14.9□□□□□ -0.02
CCDC40-209ENST00000573474 MRPS6P82932 125 aaKnown RBP14.9□□□□□ -0.02
CCDC40-209ENST00000573474 CYP24A1Q07973 514 aa14.9□□□□□ -0.02
CCDC40-209ENST00000573474 PTK7Q13308 1070 aa14.9□□□□□ -0.02
CCDC40-209ENST00000573474 TRIM14Q14142 442 aa14.9□□□□□ -0.02
CCDC40-209ENST00000573474 NOLC1Q14978 699 aaKnown RBP eCLIP14.9□□□□□ -0.02
CCDC40-209ENST00000573474 SYCP1Q15431 976 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms