RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 AXLP30530 894 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 RAB27AP51159 221 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 ZNF131P52739 623 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 EFNA5P52803 228 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 PRPF4BQ13523 1007 aaKnown RBP17.41■□□□□ 0.38
CHD3-215ENST00000572750 BTG3Q14201 252 aaPredicted RBP17.41■□□□□ 0.38
CHD3-215ENST00000572750 FAM187BQ17R55 369 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 TMEM132AQ24JP5 1023 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 TAS1R3Q7RTX0 852 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 ZNF598Q86UK7 904 aaKnown RBP17.41■□□□□ 0.38
CHD3-215ENST00000572750 SPIRE2Q8WWL2 714 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 DDX12PQ92771 950 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 PRIMPOLQ96LW4 560 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 TRAIPQ9BWF2 469 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 ELAC1Q9H777 363 aaKnown RBP17.41■□□□□ 0.38
CHD3-215ENST00000572750 PARVGQ9HBI0 331 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 KCNH3Q9ULD8 1083 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 PCDHB2Q9Y5E7 798 aa17.41■□□□□ 0.38
CHD3-215ENST00000572750 EPOPA6NHQ4 379 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 TBKBP1A7MCY6 615 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 K7ENM7 598 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 MRE11P49959 708 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 NCBP1Q09161 790 aaKnown RBP17.4■□□□□ 0.38
CHD3-215ENST00000572750 CLLU1OSQ5K130 101 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 ADALQ6DHV7 355 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 CMTR2Q8IYT2 770 aaKnown RBP17.4■□□□□ 0.38
CHD3-215ENST00000572750 MYCT1Q8N699 235 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 IQUBQ8NA54 791 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 TMEM161BQ8NDZ6 487 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 ARNTL2Q8WYA1 636 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 CCDC51Q96ER9 411 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 C17orf80Q9BSJ5 609 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 TNMDQ9H2S6 317 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 CUEDC2Q9H467 287 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 PDZD7Q9H5P4 517 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 RNF216Q9NWF9 866 aaPredicted RBP17.4■□□□□ 0.38
CHD3-215ENST00000572750 LARSQ9P2J5 1176 aaKnown RBP17.4■□□□□ 0.38
CHD3-215ENST00000572750 HCSTQ9UBK5 93 aa17.4■□□□□ 0.38
CHD3-215ENST00000572750 PRRC2BQ5JSZ5 2229 aaKnown RBP17.39■□□□□ 0.37
CHD3-215ENST00000572750 K7ERI5 159 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 ACKR2O00590 384 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 NPTXRO95502 500 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 MAPTP10636 758 aaKnown RBP17.39■□□□□ 0.37
CHD3-215ENST00000572750 CMA1P23946 247 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 SMTNP53814 917 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 NCKAP1LP55160 1127 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 SLC27A1Q6PCB7 646 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 SFR1Q86XK3 245 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 MICALL1Q8N3F8 863 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 FIBCD1Q8N539 461 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 FSIP1Q8NA03 581 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 SMG8Q8ND04 991 aaKnown RBP17.39■□□□□ 0.37
CHD3-215ENST00000572750 HELQQ8TDG4 1101 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 DNAJC19Q96DA6 116 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 TRIM6Q9C030 488 aaPredicted RBP17.39■□□□□ 0.37
CHD3-215ENST00000572750 GOLPH3LQ9H4A5 285 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 NXF3Q9H4D5 531 aaKnown RBP17.39■□□□□ 0.37
CHD3-215ENST00000572750 CD320Q9NPF0 282 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 KBTBD4Q9NVX7 518 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 CHMP5Q9NZZ3 219 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 HES2Q9Y543 173 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 IPPQ9Y573 584 aa17.39■□□□□ 0.37
CHD3-215ENST00000572750 MRPL42Q9Y6G3 142 aaKnown RBP17.39■□□□□ 0.37
CHD3-215ENST00000572750 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.38■□□□□ 0.37
CHD3-215ENST00000572750 A0A1B0GUA9 196 aa17.38■□□□□ 0.37
CHD3-215ENST00000572750 LINC00271P0C7V0 271 aa17.38■□□□□ 0.37
CHD3-215ENST00000572750 SKIP12755 728 aa17.38■□□□□ 0.37
CHD3-215ENST00000572750 NDUFA8P51970 172 aa17.38■□□□□ 0.37
CHD3-215ENST00000572750 NT5DC1Q5TFE4 455 aa17.38■□□□□ 0.37
CHD3-215ENST00000572750 EEF1DP3Q658K8 133 aa17.38■□□□□ 0.37
CHD3-215ENST00000572750 FAM178BQ8IXR5 827 aa17.38■□□□□ 0.37
CHD3-215ENST00000572750 ABI1Q8IZP0 508 aa17.38■□□□□ 0.37
CHD3-215ENST00000572750 MRPS27Q92552 414 aaKnown RBP17.38■□□□□ 0.37
CHD3-215ENST00000572750 TGS1Q96RS0 853 aaKnown RBP17.38■□□□□ 0.37
CHD3-215ENST00000572750 APOL6Q9BWW8 343 aa17.38■□□□□ 0.37
CHD3-215ENST00000572750 TMEM134Q9H6X4 195 aa17.38■□□□□ 0.37
CHD3-215ENST00000572750 HPSEQ9Y251 543 aa17.38■□□□□ 0.37
CHD3-215ENST00000572750 ATG2AQ2TAZ0 1938 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 A0A1W2PQ27 194 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 A0A1W2PQ64 194 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 A0A1W2PQD8 194 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 N4BP3O15049 544 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 HOXA2O43364 376 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 ACTN4O43707 911 aaKnown RBP17.37■□□□□ 0.37
CHD3-215ENST00000572750 TRAK2O60296 914 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 ZNF623O75123 536 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 EOMESO95936 686 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 IDEP14735 1019 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 CASP1P29466 404 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 NMT1P30419 496 aaKnown RBP17.37■□□□□ 0.37
CHD3-215ENST00000572750 CTNNB1P35222 781 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 ERVK-21P61565 698 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 STRN3Q13033 797 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 ATF7IP2Q5U623 682 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 HAUS6Q7Z4H7 955 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 GRAMD1CQ8IYS0 662 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 GDPD5Q8WTR4 605 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 CASD1Q96PB1 797 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 FIZ1Q96SL8 496 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 NTPCRQ9BSD7 190 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms