RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 RGL1Q9NZL6 768 aa21.45■■□□□ 1.02
NUP88-203ENST00000572019 CACNG4Q9UBN1 327 aa21.45■■□□□ 1.02
NUP88-203ENST00000572019 IPPQ9Y573 584 aa21.45■■□□□ 1.02
NUP88-203ENST00000572019 CACNA1AO00555 2505 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 URODP06132 367 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 MLH1P40692 756 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 DSC1Q08554 894 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 SSRP1Q08945 709 aaKnown RBP21.44■■□□□ 1.02
NUP88-203ENST00000572019 PPP2R5CQ13362 524 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 MOXD1Q6UVY6 613 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 SRGAP1Q7Z6B7 1085 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 RNF149Q8NC42 400 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 CMASQ8NFW8 434 aaPredicted RBP21.44■■□□□ 1.02
NUP88-203ENST00000572019 RABGGTAQ92696 567 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 HAS1Q92839 578 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 CPB2Q96IY4 423 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 KCNMB3Q9NPA1 279 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 CA14Q9ULX7 337 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 CLUHO75153 1309 aa21.44■■□□□ 1.02
NUP88-203ENST00000572019 ARL5CA6NH57 179 aa21.43■■□□□ 1.02
NUP88-203ENST00000572019 GBP2P32456 591 aaPredicted RBP21.43■■□□□ 1.02
NUP88-203ENST00000572019 OR1G1P47890 313 aa21.43■■□□□ 1.02
NUP88-203ENST00000572019 SCNN1GP51170 649 aa21.43■■□□□ 1.02
NUP88-203ENST00000572019 NONOQ15233 471 aaKnown RBP eCLIP21.43■■□□□ 1.02
NUP88-203ENST00000572019 FERMT3Q86UX7 667 aa21.43■■□□□ 1.02
NUP88-203ENST00000572019 SLC44A3Q8N4M1 653 aa21.43■■□□□ 1.02
NUP88-203ENST00000572019 PSPC1Q8WXF1 523 aaKnown RBP21.43■■□□□ 1.02
NUP88-203ENST00000572019 SLC7A3Q8WY07 619 aa21.43■■□□□ 1.02
NUP88-203ENST00000572019 RIN2Q8WYP3 895 aaPredicted RBP21.43■■□□□ 1.02
NUP88-203ENST00000572019 XPNPEP1Q9NQW7 623 aa21.43■■□□□ 1.02
NUP88-203ENST00000572019 IGSF9Q9P2J2 1179 aa21.43■■□□□ 1.02
NUP88-203ENST00000572019 CNTNAP2Q9UHC6 1331 aa21.43■■□□□ 1.02
NUP88-203ENST00000572019 OTOGLQ3ZCN5 2332 aa21.43■■□□□ 1.02
NUP88-203ENST00000572019 CARNS1A5YM72 827 aa21.42■■□□□ 1.02
NUP88-203ENST00000572019 TSPAN1O60635 241 aa21.42■■□□□ 1.02
NUP88-203ENST00000572019 EMC2Q15006 297 aa21.42■■□□□ 1.02
NUP88-203ENST00000572019 PALB2Q86YC2 1186 aa21.42■■□□□ 1.02
NUP88-203ENST00000572019 GLYCTKQ8IVS8 523 aa21.42■■□□□ 1.02
NUP88-203ENST00000572019 SMG7Q92540 1137 aaKnown RBP21.42■■□□□ 1.02
NUP88-203ENST00000572019 RTP3Q9BQQ7 232 aa21.42■■□□□ 1.02
NUP88-203ENST00000572019 LXNQ9BS40 222 aa21.42■■□□□ 1.02
NUP88-203ENST00000572019 C22orf23Q9BZE7 217 aa21.42■■□□□ 1.02
NUP88-203ENST00000572019 RXFP1Q9HBX9 757 aa21.42■■□□□ 1.02
NUP88-203ENST00000572019 KANSL3Q9P2N6 904 aa21.42■■□□□ 1.02
NUP88-203ENST00000572019 R4GN57 208 aa21.42■■□□□ 1.02
NUP88-203ENST00000572019 VWA8A3KMH1 1905 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 GLUD1P00367 558 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 ADH1AP07327 375 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 ITGA4P13612 1032 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 RPL17P18621 184 aaKnown RBP21.41■■□□□ 1.02
NUP88-203ENST00000572019 ID4P47928 161 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 GLUD2P49448 558 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 FOXK2Q01167 660 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 STK3Q13188 491 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 CTTNQ14247 550 aaKnown RBP21.41■■□□□ 1.02
NUP88-203ENST00000572019 EARS2Q5JPH6 523 aaKnown RBP21.41■■□□□ 1.02
NUP88-203ENST00000572019 TRIM22Q8IYM9 498 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 GSTCDQ8NEC7 633 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 OXER1Q8TDS5 423 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 JPH2Q9BR39 696 aaPredicted RBP21.41■■□□□ 1.02
NUP88-203ENST00000572019 APOL6Q9BWW8 343 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 GPR62Q9BZJ7 368 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 SLKQ9H2G2 1235 aaPredicted RBP21.41■■□□□ 1.02
NUP88-203ENST00000572019 TBC1D17Q9HA65 648 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 EPS15L1Q9UBC2 864 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 WNT16Q9UBV4 365 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 NOTCH4Q99466 2003 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 MIA3Q5JRA6 1907 aa21.41■■□□□ 1.02
NUP88-203ENST00000572019 DNAH14Q0VDD8 3507 aa21.4■■□□□ 1.02
NUP88-203ENST00000572019 FAM205CA6NFA0 338 aa21.4■■□□□ 1.02
NUP88-203ENST00000572019 DEXIO95424 95 aa21.4■■□□□ 1.02
NUP88-203ENST00000572019 P4HBP07237 508 aaKnown RBP21.4■■□□□ 1.02
NUP88-203ENST00000572019 DCNP07585 359 aaKnown RBP21.4■■□□□ 1.02
NUP88-203ENST00000572019 YWHABP31946 246 aaKnown RBP21.4■■□□□ 1.02
NUP88-203ENST00000572019 DSG1Q02413 1049 aa21.4■■□□□ 1.02
NUP88-203ENST00000572019 CYP4A11Q02928 519 aa21.4■■□□□ 1.02
NUP88-203ENST00000572019 SPIRE1Q08AE8 756 aa21.4■■□□□ 1.02
NUP88-203ENST00000572019 CENPQQ7L2Z9 268 aaPredicted RBP21.4■■□□□ 1.02
NUP88-203ENST00000572019 CDR2LQ86X02 465 aaPredicted RBP21.4■■□□□ 1.02
NUP88-203ENST00000572019 GPR152Q8TDT2 470 aa21.4■■□□□ 1.02
NUP88-203ENST00000572019 DYDC2Q96IM9 177 aa21.4■■□□□ 1.02
NUP88-203ENST00000572019 RPP25Q9BUL9 199 aaKnown RBP21.4■■□□□ 1.02
NUP88-203ENST00000572019 NXF3Q9H4D5 531 aaKnown RBP21.4■■□□□ 1.02
NUP88-203ENST00000572019 CHST7Q9NS84 486 aa21.4■■□□□ 1.02
NUP88-203ENST00000572019 STK25O00506 426 aa21.39■■□□□ 1.01
NUP88-203ENST00000572019 TGM5O43548 720 aa21.39■■□□□ 1.01
NUP88-203ENST00000572019 RFC5P40937 340 aa21.39■■□□□ 1.01
NUP88-203ENST00000572019 AMHR2Q16671 573 aa21.39■■□□□ 1.01
NUP88-203ENST00000572019 SPECC1Q5M775 1068 aa21.39■■□□□ 1.01
NUP88-203ENST00000572019 RUFY3Q7L099 469 aa21.39■■□□□ 1.01
NUP88-203ENST00000572019 POTEDQ86YR6 584 aa21.39■■□□□ 1.01
NUP88-203ENST00000572019 C4orf19Q8IY42 314 aa21.39■■□□□ 1.01
NUP88-203ENST00000572019 ASAP3Q8TDY4 903 aa21.39■■□□□ 1.01
NUP88-203ENST00000572019 NT5C3AQ9H0P0 336 aa21.39■■□□□ 1.01
NUP88-203ENST00000572019 ZSWIM6Q9HCJ5 1215 aa21.39■■□□□ 1.01
NUP88-203ENST00000572019 DLGAP2Q9P1A6 1054 aa21.39■■□□□ 1.01
NUP88-203ENST00000572019 B4GALT5O43286 388 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 LRRN2O75325 713 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 PAPLNO95428 1278 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 SRFP11831 508 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms