RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 PBX4Q9BYU1 374 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 RNF19AQ9NV58 838 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 SEL1LQ9UBV2 794 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 PCDHB2Q9Y5E7 798 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 LCHNA4D1U4 455 aa18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 AMHP03971 560 aa18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 FGFR1P11362 822 aa18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 AXLP30530 894 aa18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 POSTNQ15063 836 aa18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 NOTUMQ6P988 496 aa18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 SPRED2Q7Z698 418 aa18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 GPT2Q8TD30 523 aa18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 SLC9A7Q96T83 725 aa18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 SLC39A2Q9NP94 309 aa18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 KCNG1Q9UIX4 513 aa18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 YBX2Q9Y2T7 364 aaKnown RBP18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 PHLPP2Q6ZVD8 1323 aa18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 MICAL3Q7RTP6 2002 aa18.29■□□□□ 0.52
CNEP1R1-210ENST00000568890 ZNF623O75123 536 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 PRPF6O94906 941 aaKnown RBP18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 PROZP22891 400 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 HABP4Q5JVS0 413 aaKnown RBP18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 ATF7IP2Q5U623 682 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 SPATA20Q8TB22 786 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 LRCH3Q96II8 777 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 CXCL16Q9H2A7 254 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 MTIF3Q9H2K0 278 aaKnown RBP18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 C1orf112Q9NSG2 853 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 PCDHA5Q9Y5H7 936 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 EYSQ5T1H1 3165 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 ANKRD63C9JTQ0 380 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 DGKIO75912 1065 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 GCNT3O95395 438 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 RPN1P04843 607 aaKnown RBP18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 AGMOQ6ZNB7 445 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 EPM2AIP1Q7L775 607 aaPredicted RBP18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 KIAA0895Q8NCT3 520 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 ZNF689Q96CS4 500 aaPredicted RBP18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 NXF3Q9H4D5 531 aaKnown RBP18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 RC3H2Q9HBD1 1191 aaKnown RBP18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 TNFSF13BQ9Y275 285 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 IPPQ9Y573 584 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 PTPRSQ13332 1948 aa18.28■□□□□ 0.52
CNEP1R1-210ENST00000568890 MYL1P05976 194 aa18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 HTRA4P83105 476 aaPredicted RBP18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 CAMK4Q16566 473 aa18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 FAM26FQ5R3K3 315 aa18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 KANK3Q6NY19 840 aa18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 SLC27A1Q6PCB7 646 aa18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 MRPL10Q7Z7H8 261 aaKnown RBP18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 MAP4K3Q8IVH8 894 aa18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 TMEM192Q8IY95 271 aa18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 CEP120Q8N960 986 aa18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 RNF169Q8NCN4 708 aa18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 SCFD1Q8WVM8 642 aa18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 MRPL4Q9BYD3 311 aaKnown RBP18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 TMEM161AQ9NX61 479 aa18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 PCDHB7Q9Y5E2 793 aa18.27■□□□□ 0.52
CNEP1R1-210ENST00000568890 NPTXRO95502 500 aa18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 ADSSP30520 456 aa18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 NCBP1Q09161 790 aaKnown RBP18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 CLLU1OSQ5K130 101 aa18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 NPAS4Q8IUM7 802 aa18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 HCSTQ9UBK5 93 aa18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 MYH11P35749 1972 aa18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 KINO60870 393 aaKnown RBP18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 STRN3Q13033 797 aa18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 SEZ6Q53EL9 994 aa18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 FAM43BQ6ZT52 329 aaPredicted RBP18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 ZBTB33Q86T24 672 aa18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 ELOA2Q8IYF1 753 aaPredicted RBP18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 RAD9AQ99638 391 aa18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 ELAC1Q9H777 363 aaKnown RBP18.26■□□□□ 0.51
CNEP1R1-210ENST00000568890 COL4A6Q14031 1691 aa18.25■□□□□ 0.51
CNEP1R1-210ENST00000568890 MEFVO15553 781 aaPredicted RBP18.25■□□□□ 0.51
CNEP1R1-210ENST00000568890 TLL1O43897 1013 aa18.25■□□□□ 0.51
CNEP1R1-210ENST00000568890 RHOBTB3O94955 611 aa18.25■□□□□ 0.51
CNEP1R1-210ENST00000568890 EOMESO95936 686 aa18.25■□□□□ 0.51
CNEP1R1-210ENST00000568890 PIGRP01833 764 aa18.25■□□□□ 0.51
CNEP1R1-210ENST00000568890 AKAP5P24588 427 aa18.25■□□□□ 0.51
CNEP1R1-210ENST00000568890 ZSWIM2Q8NEG5 633 aa18.25■□□□□ 0.51
CNEP1R1-210ENST00000568890 ZNF507Q8TCN5 953 aa18.25■□□□□ 0.51
CNEP1R1-210ENST00000568890 ZBED2Q9BTP6 218 aa18.25■□□□□ 0.51
CNEP1R1-210ENST00000568890 CDT1Q9H211 546 aa18.25■□□□□ 0.51
CNEP1R1-210ENST00000568890 GDAQ9Y2T3 454 aa18.25■□□□□ 0.51
CNEP1R1-210ENST00000568890 PCDHB13Q9Y5F0 798 aa18.25■□□□□ 0.51
CNEP1R1-210ENST00000568890 H0YCG3 227 aa18.24■□□□□ 0.51
CNEP1R1-210ENST00000568890 TOM1L1O75674 476 aa18.24■□□□□ 0.51
CNEP1R1-210ENST00000568890 CA3P07451 260 aa18.24■□□□□ 0.51
CNEP1R1-210ENST00000568890 LINC00271P0C7V0 271 aa18.24■□□□□ 0.51
CNEP1R1-210ENST00000568890 MCM4P33991 863 aa18.24■□□□□ 0.51
CNEP1R1-210ENST00000568890 SMAD3P84022 425 aaKnown RBP18.24■□□□□ 0.51
CNEP1R1-210ENST00000568890 L1TD1Q5T7N2 865 aaKnown RBP18.24■□□□□ 0.51
CNEP1R1-210ENST00000568890 ISM2Q6H9L7 571 aa18.24■□□□□ 0.51
CNEP1R1-210ENST00000568890 ZPBP2Q6X784 338 aa18.24■□□□□ 0.51
CNEP1R1-210ENST00000568890 LRRC55Q6ZSA7 311 aa18.24■□□□□ 0.51
CNEP1R1-210ENST00000568890 GSTCDQ8NEC7 633 aa18.24■□□□□ 0.51
CNEP1R1-210ENST00000568890 CASD1Q96PB1 797 aa18.24■□□□□ 0.51
CNEP1R1-210ENST00000568890 MIOSQ9NXC5 875 aa18.24■□□□□ 0.51
CNEP1R1-210ENST00000568890 HNRNPDLO14979 420 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms