RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 TRAIPQ9BWF2 469 aa16.33■□□□□ 0.2
KLHDC4-223ENST00000568499 STRA6Q9BX79 667 aa16.33■□□□□ 0.2
KLHDC4-223ENST00000568499 TMX1Q9H3N1 280 aa16.33■□□□□ 0.2
KLHDC4-223ENST00000568499 LRFN2Q9ULH4 789 aa16.33■□□□□ 0.2
KLHDC4-223ENST00000568499 TNFSF13BQ9Y275 285 aa16.33■□□□□ 0.2
KLHDC4-223ENST00000568499 LETM1O95202 739 aaPredicted RBP16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 PIGRP01833 764 aa16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 EPHB4P54760 987 aa16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 DSC3Q14574 896 aa16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 NFKBIBQ15653 356 aa16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 KYAT1Q16773 422 aa16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 ZNF568Q3ZCX4 644 aa16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 MPZL3Q6UWV2 235 aa16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 EPM2AIP1Q7L775 607 aaPredicted RBP16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 TAS1R3Q7RTX0 852 aa16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 RNPC3Q96LT9 517 aaKnown RBP16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 GBP3Q9H0R5 595 aa16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 CGNQ9P2M7 1197 aaKnown RBP16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 MAN1B1Q9UKM7 699 aa16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 PCDHB7Q9Y5E2 793 aa16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 SLC4A7Q9Y6M7 1214 aa16.32■□□□□ 0.2
KLHDC4-223ENST00000568499 MYH11P35749 1972 aa16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 A0A0U1RQF3 1178 aa16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 EOMESO95936 686 aa16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 CASP5P51878 434 aa16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 KNOP1Q1ED39 458 aaKnown RBP16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 BMT2Q1RMZ1 405 aa16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 CAVIN1Q6NZI2 390 aaKnown RBP16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 GUF1Q8N442 669 aaKnown RBP16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 KIAA0895Q8NCT3 520 aa16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 PHOSPHO2Q8TCD6 241 aa16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 SCFD1Q8WVM8 642 aa16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 VWCEQ96DN2 955 aa16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 PDZD7Q9H5P4 517 aa16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 FAM105AQ9NUU6 356 aa16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 ANKFY1Q9P2R3 1169 aa16.31■□□□□ 0.2
KLHDC4-223ENST00000568499 BIN1O00499 593 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 HOXA2O43364 376 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 MGEA5O60502 916 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 NPTXRO95502 500 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 MCF2P10911 925 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 IBSPP21815 317 aaPredicted RBP16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 WDR5P61964 334 aaKnown RBP16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 MORC3Q14149 939 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 SASS6Q6UVJ0 657 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 NPAS4Q8IUM7 802 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 NELFCDQ8IXH7 590 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 POMGNT1Q8WZA1 660 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 SLC9A7Q96T83 725 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 FGFBP2Q9BYJ0 223 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 ELAC1Q9H777 363 aaKnown RBP16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 UBN1Q9NPG3 1134 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 DACH1Q9UI36 760 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 GDAQ9Y2T3 454 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 PCDHB2Q9Y5E7 798 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 LTBP2Q14767 1821 aa16.3■□□□□ 0.2
KLHDC4-223ENST00000568499 C9IYK1 514 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 PSMA7O14818 248 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 KIAA0391O15091 583 aaKnown RBP16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 CALUO43852 315 aaPredicted RBP16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 ZNF623O75123 536 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 FAM189BP81408 668 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 NOLC1Q14978 699 aaKnown RBP eCLIP16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 SHHQ15465 462 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 COBLL1Q53SF7 1204 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 ISM2Q6H9L7 571 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 ZBTB33Q86T24 672 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 RTN4RL1Q86UN2 441 aaPredicted RBP16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 ECHDC2Q86YB7 292 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 RNF169Q8NCN4 708 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 GLIS3Q8NEA6 775 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 RSPH1Q8WYR4 309 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 TSG101Q99816 390 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 ZBED2Q9BTP6 218 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 MSTO1Q9BUK6 570 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 CCDC94Q9BW85 323 aaPredicted RBP16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 TMEM161AQ9NX61 479 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 PCDH10Q9P2E7 1040 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 USP20Q9Y2K6 914 aa16.29■□□□□ 0.2
KLHDC4-223ENST00000568499 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 TTLL13PA6NNM8 815 aa16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 PDXKO00764 312 aa16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 LDHAP00338 332 aaKnown RBP16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 HARSP12081 509 aaKnown RBP16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 ITGA4P13612 1032 aa16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 ATP2A2P16615 1042 aaKnown RBP16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 GARTP22102 1010 aa16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 PROZP22891 400 aa16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 YARSP54577 528 aaKnown RBP16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 MCL1Q07820 350 aa16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 KCNA1Q09470 495 aa16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 TCTN1Q2MV58 587 aa16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 PRPF38BQ5VTL8 546 aaKnown RBP16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 ARMCX5Q6P1M9 558 aa16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 CHRDL2Q6WN34 429 aa16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 CDR2LQ86X02 465 aaPredicted RBP16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 TDHQ8IZJ6 230 aa16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 ABI1Q8IZP0 508 aa16.28■□□□□ 0.2
KLHDC4-223ENST00000568499 MLKLQ8NB16 471 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms