RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 NXF3Q9H4D5 531 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 TUFT1Q9NNX1 390 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 KLK14Q9P0G3 267 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 FAN1Q9Y2M0 1017 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 ARHGEF35A5YM69 484 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 ARL5CA6NH57 179 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 TTLL13PA6NNM8 815 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 LOC730098B7Z3J9 87 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 C2CD2LO14523 706 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 CD2BP2O95400 341 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 ALDH2P05091 517 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 CTSAP10619 480 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 XRCC6P12956 609 aaKnown RBP eCLIP13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 TOB1P50616 345 aaPredicted RBP13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 CBX2Q14781 532 aaPredicted RBP13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 RARS2Q5T160 578 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 MCTP1Q6DN14 999 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 TMEM184AQ6ZMB5 413 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 TAS1R1Q7RTX1 841 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 C4orf32Q8N8J7 132 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 SUSD6Q92537 303 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 CASP10Q92851 521 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 POLR3CQ9BUI4 534 aaPredicted RBP13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 CACNG4Q9UBN1 327 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 PARP2Q9UGN5 583 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 NOL7Q9UMY1 257 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 PCDHB6Q9Y5E3 794 aa13.55□□□□□ -0.24
GTF3C1-208ENST00000567843 MUC6Q6W4X9 2439 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 PP2D1A8MPX8 630 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 PRR33A8MZF0 331 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 RPA1P27694 616 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 CDC25AP30304 524 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 AXLP30530 894 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 PTGDRQ13258 359 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 BMS1Q14692 1282 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 RABEP1Q15276 862 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 PTPN14Q15678 1187 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 TMEM132AQ24JP5 1023 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 IFNLR1Q8IU57 520 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 CNNM3Q8NE01 707 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 KIFC3Q9BVG8 833 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 MARCH5Q9NX47 278 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 KANSL3Q9P2N6 904 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 LRWD1Q9UFC0 647 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 DBR1Q9UK59 544 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 KIAA1024Q9UPX6 916 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 HCN4Q9Y3Q4 1203 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 CNTNAP2Q9UHC6 1331 aa13.54□□□□□ -0.24
GTF3C1-208ENST00000567843 ARID2Q68CP9 1835 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 FSD2A1L4K1 749 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 EDN1P05305 212 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 CYP11B2P19099 503 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 KLRC2P26717 231 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 POU5F1BQ06416 359 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 ZRSR1Q15695 479 aaKnown RBP13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 HERC4Q5GLZ8 1057 aaPredicted RBP13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 SLC27A1Q6PCB7 646 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 TMC5Q6UXY8 1006 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 ZBTB8OSQ8IWT0 167 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 COLGALT2Q8IYK4 626 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 MCPH1Q8NEM0 835 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 SNX29Q8TEQ0 813 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 CCDC51Q96ER9 411 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 TMX3Q96JJ7 454 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 B3GALT6Q96L58 329 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 KLHL5Q96PQ7 755 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 TMEM175Q9BSA9 504 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 BHMT2Q9H2M3 363 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 UBN1Q9NPG3 1134 aa13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 DDX19AQ9NUU7 478 aaKnown RBP13.53□□□□□ -0.24
GTF3C1-208ENST00000567843 TECTAO75443 2155 aa13.52□□□□□ -0.24
GTF3C1-208ENST00000567843 A0A1B0GUA9 196 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 E9PMD0 336 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 ST18O60284 1047 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 CNPP09543 421 aaKnown RBP13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 HOXB8P17481 243 aaPredicted RBP13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 U2AF2P26368 475 aaKnown RBP eCLIP13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 TRAPPC10P48553 1259 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 FXR2P51116 673 aaKnown RBP eCLIP13.52□□□□□ -0.252e-7■■■■□ 22.4
GTF3C1-208ENST00000567843 ORC2Q13416 577 aaPredicted RBP13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 IL17AQ16552 155 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 CES5AQ6NT32 575 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 HFE2Q6ZVN8 426 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 SLC22A17Q8WUG5 538 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 RSPH1Q8WYR4 309 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 FAM122AQ96E09 287 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 NFKBIZQ9BYH8 718 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 CXCL16Q9H2A7 254 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 ADAM7Q9H2U9 754 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 POMKQ9H5K3 350 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 PRMT7Q9NVM4 692 aaPredicted RBP13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 SNTG2Q9NY99 539 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 ZDBF2Q9HCK1 2354 aa13.52□□□□□ -0.25
GTF3C1-208ENST00000567843 PRKCBP05771 671 aa13.51□□□□□ -0.25
GTF3C1-208ENST00000567843 GJB2P29033 226 aa13.51□□□□□ -0.25
GTF3C1-208ENST00000567843 PRPF4BQ13523 1007 aaKnown RBP13.51□□□□□ -0.25
GTF3C1-208ENST00000567843 PCBP1Q15365 356 aaKnown RBP eCLIP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms