RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 RANBP17Q9H2T7 1088 aaKnown RBP13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 PABPC3Q9H361 631 aaKnown RBP13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 ROPN1Q9HAT0 212 aaPredicted RBP13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 MARCOQ9UEW3 520 aaPredicted RBP13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 HAO1Q9UJM8 370 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 PCDHA6Q9UN73 950 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 BCS1LQ9Y276 419 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 PCDHA8Q9Y5H6 950 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 ZNF335Q9H4Z2 1342 aaPredicted RBP13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 HSPA8P11142 646 aaKnown RBP13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 PRLRP16471 622 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 ZNF18P17022 549 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 ARSEP51690 589 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 PEX3P56589 373 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 FOXO4P98177 505 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 BTKQ06187 659 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 ERICH1Q86X53 443 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 CEP170P1Q96L14 293 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 CSRNP1Q96S65 589 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 AGPAT1Q99943 283 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 C7orf25Q9BPX7 421 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 ADA2Q9NZK5 511 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 PRPSAP2O60256 369 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 AARSP49588 968 aaKnown RBP eCLIP13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 TFAMQ00059 246 aaKnown RBP13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 RCN1Q15293 331 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 FRMD5Q7Z6J6 570 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 EPS8L3Q8TE67 593 aaKnown RBP13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 INPP5FQ9Y2H2 1132 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 ORC4O43929 436 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 ITIH2P19823 946 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 STAT3P40763 770 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 SNAP25P60880 206 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 ABCB5Q2M3G0 1257 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 FUKQ8N0W3 1084 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 SLC17A8Q8NDX2 589 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 CAVIN3Q969G5 261 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 FAM149B1Q96BN6 582 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 RIOK1Q9BRS2 568 aaKnown RBP13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 A0A087X0T9 212 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 MYMKA6NI61 221 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 FAM228BP0C875 321 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 THOC5Q13769 683 aaKnown RBP13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 CYLC2Q14093 348 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 OR6B2Q6IFH4 312 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 BZW1Q7L1Q6 419 aaKnown RBP13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 KLF6Q99612 283 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 DCP1AQ9NPI6 582 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 SEPT9Q9UHD8 586 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 MID2Q9UJV3 735 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 FSBPO95073 299 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 ACADSP16219 412 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 IL6STP40189 918 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 ITKQ08881 620 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 SLC12A1Q13621 1099 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 HLFQ16534 295 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 CDO1Q16878 200 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 RHOT1Q8IXI2 618 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 FAM129AQ9BZQ8 928 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 ING2Q9H160 280 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 CCPG1Q9ULG6 757 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 SALL3Q9BXA9 1300 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 MAGEA13PA6NCF6 341 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 TLR3O15455 904 aaKnown RBP13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 PRDX5P30044 214 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 RABL6Q3YEC7 729 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 FOXP4Q8IVH2 680 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 MAP3K14Q99558 947 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 KLC2Q9H0B6 622 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 FAM96AQ9H5X1 160 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 PDP2Q9P2J9 529 aa13.17□□□□□ -0.3
CSPG4P13-202ENST00000567704 NPHP3-ACAD11A0A0J9YXS1 232 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 GRM4Q14833 912 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 SCARA5Q6ZMJ2 495 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 RHPN2Q8IUC4 686 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 MIEF2Q96C03 454 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 ORC6Q9Y5N6 252 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 SPATA31D1Q6ZQQ2 1576 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 TULP2O00295 520 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 CDC25CP30307 473 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 PSMC1P62191 440 aaKnown RBP13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 TBX2Q13207 712 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 CDKAL1Q5VV42 579 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 VWDEQ8N2E2 1590 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 TTC13Q8NBP0 860 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 KCND1Q9NSA2 647 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 DEPDC5O75140 1603 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 ERBB3P21860 1342 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 FER1L4A9Z1Z3 1794 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 VAMP7P51809 220 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 SMAD1Q15797 465 aaKnown RBP13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 HIF1AQ16665 826 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 NGRNQ9NPE2 291 aaKnown RBP13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 ALG6Q9Y672 507 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 ALKQ9UM73 1620 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 ZNF233A6NK53 670 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 H3BRJ5 948 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 SYF2O95926 243 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms