RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 TSHZ3Q63HK5 1081 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 EEF1DP3Q658K8 133 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 RCSD1Q6JBY9 416 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 HHIPL2Q6UWX4 724 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 ESPNLQ6ZVH7 1005 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 KCNK18Q7Z418 384 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 KRT77Q7Z794 578 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 RTN4RL1Q86UN2 441 aaPredicted RBP3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 CACNA2D3Q8IZS8 1091 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 TXLNBQ8N3L3 684 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 SH2D3CQ8N5H7 860 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 TOP6BLQ8N6T0 577 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 RGMAQ96B86 450 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 APIPQ96GX9 242 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 CCDC120Q96HB5 630 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 SERINC2Q96SA4 455 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 FAM167BQ9BTA0 163 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 CDADC1Q9BWV3 514 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 TMEM120AQ9BXJ8 343 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 SLC12A9Q9BXP2 914 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 BTBD1Q9H0C5 482 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 KCTD10Q9H3F6 313 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 UNC45AQ9H3U1 944 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 PRDM12Q9H4Q4 367 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 PRKRIP1Q9H875 184 aaPredicted RBP3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 ZMAT3Q9HA38 289 aaKnown RBP3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 PLEKHA5Q9HAU0 1116 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 KMT5AQ9NQR1 393 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 GJB4Q9NTQ9 266 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 TBC1D22BQ9NU19 505 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 DACT1Q9NYF0 836 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 KCNH3Q9ULD8 1083 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 PADI4Q9UM07 663 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 CTNND2Q9UQB3 1225 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 TIMM13Q9Y5L4 95 aaPredicted RBP3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 ITIH6Q6UXX5 1313 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 ST20-MTHFSA0A0A6YYL1 179 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 SSU72P8A0A1W2PR75 194 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 TCRBV5S4A2TA0A5A2 114 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 LRRC14BA6NHZ5 514 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 A6NLC8 198 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 HTRA2O43464 458 aaPredicted RBP3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 CYP17A1P05093 508 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 SYPP08247 313 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 KITP10721 976 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 VEGFAP15692 232 aaPredicted RBP3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 XBP1P17861 261 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 CYP7A1P22680 504 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 CALRP27797 417 aaKnown RBP3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 SLC7A1P30825 629 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 LIFRP42702 1097 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 MAP2K6P52564 334 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 ITGA8P53708 1063 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 OXCT1P55809 520 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 LGALS4P56470 323 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 MRPS9P82933 396 aaKnown RBP3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 SPIRE1Q08AE8 756 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 GALNT1Q10472 559 aaPredicted RBP3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 TUSC3Q13454 348 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 KCNA10Q16322 511 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 ZBTB41Q5SVQ8 909 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 TMCO3Q6UWJ1 677 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 RFX8Q6ZV50 586 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 FASTKD5Q7L8L6 764 aaKnown RBP3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 NLRP10Q86W26 655 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 SDR16C5Q8N3Y7 309 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 PLBD2Q8NHP8 589 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 ASB12Q8WXK4 309 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 RUBCNQ92622 972 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 DPF2Q92785 391 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 RAB24Q969Q5 203 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 ZNF566Q969W8 418 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 C18orf8Q96DM3 657 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 DDX11Q96FC9 970 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 MMP19Q99542 508 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 SDF4Q9BRK5 362 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 CHCHD6Q9BRQ6 235 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 KRTAP9-8Q9BYQ0 159 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 UBN1Q9NPG3 1134 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 OBP2BQ9NPH6 170 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 SH3GLB2Q9NR46 395 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 SMYD2Q9NRG4 433 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 HELLSQ9NRZ9 838 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 AP5S1Q9NUS5 200 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 MRGBPQ9NV56 204 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 CPA4Q9UI42 421 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 GJD2Q9UKL4 321 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 FRMD4BQ9Y2L6 1034 aa3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 MAGED1Q9Y5V3 778 aaPredicted RBP3.87□□□□□ -1.79
HERPUD1-211ENST00000566550 TRBV23OR9-2A0A075B6M9 112 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 A0A1W2PPL8 197 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 PRSS38A1L453 326 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 FSD2A1L4K1 749 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 ANKRD18BA2A2Z9 1011 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 PRAMEF25A6NGN4 478 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 WTIPA6NIX2 430 aaPredicted RBP3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 LGALS16A8MUM7 142 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 TISP43B9A030 160 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 B9A039 149 aa3.86□□□□□ -1.79
HERPUD1-211ENST00000566550 F8W8V4 182 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms