RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ORC2Q13416 577 aaPredicted RBP20.33■□□□□ 0.85
USB1-213ENST00000566292 TPRNQ4KMQ1 711 aa20.33■□□□□ 0.85
USB1-213ENST00000566292 TTC38Q5R3I4 469 aa20.33■□□□□ 0.85
USB1-213ENST00000566292 POTEGQ6S5H5 508 aa20.33■□□□□ 0.85
USB1-213ENST00000566292 CDR2LQ86X02 465 aaPredicted RBP20.33■□□□□ 0.85
USB1-213ENST00000566292 FAM193BQ96PV7 902 aaPredicted RBP20.33■□□□□ 0.85
USB1-213ENST00000566292 GAD1Q99259 594 aa20.33■□□□□ 0.85
USB1-213ENST00000566292 UBN1Q9NPG3 1134 aa20.33■□□□□ 0.85
USB1-213ENST00000566292 MIOSQ9NXC5 875 aa20.33■□□□□ 0.85
USB1-213ENST00000566292 FAN1Q9Y2M0 1017 aa20.33■□□□□ 0.85
USB1-213ENST00000566292 MYO10Q9HD67 2058 aa20.33■□□□□ 0.84
USB1-213ENST00000566292 PLXNA3P51805 1871 aa20.33■□□□□ 0.84
USB1-213ENST00000566292 DENND4AQ7Z401 1863 aa20.33■□□□□ 0.84
USB1-213ENST00000566292 ARL5CA6NH57 179 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 ALDH2P05091 517 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 EPCAMP16422 314 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 RPA1P27694 616 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 MLH1P40692 756 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 RBM25P49756 843 aaKnown RBP20.32■□□□□ 0.84
USB1-213ENST00000566292 NCBP1Q09161 790 aaKnown RBP20.32■□□□□ 0.84
USB1-213ENST00000566292 GIT2Q14161 759 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 NBR1Q14596 966 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 NOSTRINQ8IVI9 506 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 COLGALT2Q8IYK4 626 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 C4orf32Q8N8J7 132 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 SLC22A17Q8WUG5 538 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 ZFP42Q96MM3 310 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 NACC1Q96RE7 527 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 ADAM7Q9H2U9 754 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 NXF3Q9H4D5 531 aaKnown RBP20.32■□□□□ 0.84
USB1-213ENST00000566292 MARCH5Q9NX47 278 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 C2orf16Q68DN1 1984 aa20.32■□□□□ 0.84
USB1-213ENST00000566292 LRRIQ4A6NIV6 560 aa20.31■□□□□ 0.84
USB1-213ENST00000566292 SSBP05455 408 aaKnown RBP eCLIP20.31■□□□□ 0.84
USB1-213ENST00000566292 SP100P23497 879 aaPredicted RBP20.31■□□□□ 0.84
USB1-213ENST00000566292 SCNN1GP51170 649 aa20.31■□□□□ 0.84
USB1-213ENST00000566292 ZXDAP98168 799 aa20.31■□□□□ 0.84
USB1-213ENST00000566292 ITIH3Q06033 890 aa20.31■□□□□ 0.84
USB1-213ENST00000566292 DSC1Q08554 894 aa20.31■□□□□ 0.84
USB1-213ENST00000566292 KANK3Q6NY19 840 aa20.31■□□□□ 0.84
USB1-213ENST00000566292 C12orf76Q8N812 135 aaPredicted RBP20.31■□□□□ 0.84
USB1-213ENST00000566292 FAM184AQ8NB25 1140 aa20.31■□□□□ 0.84
USB1-213ENST00000566292 MCPH1Q8NEM0 835 aa20.31■□□□□ 0.84
USB1-213ENST00000566292 BSNDQ8WZ55 320 aa20.31■□□□□ 0.84
USB1-213ENST00000566292 APOL6Q9BWW8 343 aa20.31■□□□□ 0.84
USB1-213ENST00000566292 POMKQ9H5K3 350 aa20.31■□□□□ 0.84
USB1-213ENST00000566292 PRG3Q9Y2Y8 225 aaPredicted RBP20.31■□□□□ 0.84
USB1-213ENST00000566292 A0A1B0GUA9 196 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 LILRB3O75022 631 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 NPTXRO95502 500 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 WEE2P0C1S8 567 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 TRAPPC10P48553 1259 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 ECM1Q16610 540 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 RARS2Q5T160 578 aaKnown RBP20.3■□□□□ 0.84
USB1-213ENST00000566292 CDCA2Q69YH5 1023 aaPredicted RBP20.3■□□□□ 0.84
USB1-213ENST00000566292 CES5AQ6NT32 575 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 TRIM67Q6ZTA4 783 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 TMEM87AQ8NBN3 555 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 GSTCDQ8NEC7 633 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 ERMNQ8TAM6 284 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 FEZF2Q8TBJ5 459 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 KLHL5Q96PQ7 755 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 TRIM6Q9C030 488 aaPredicted RBP20.3■□□□□ 0.84
USB1-213ENST00000566292 DZANK1Q9NVP4 752 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 GIT1Q9Y2X7 761 aa20.3■□□□□ 0.84
USB1-213ENST00000566292 F8W810 466 aa20.29■□□□□ 0.84
USB1-213ENST00000566292 EFEMP2O95967 443 aa20.29■□□□□ 0.84
USB1-213ENST00000566292 AKAP5P24588 427 aa20.29■□□□□ 0.84
USB1-213ENST00000566292 U2AF2P26368 475 aaKnown RBP eCLIP20.29■□□□□ 0.84
USB1-213ENST00000566292 OR1G1P47890 313 aa20.29■□□□□ 0.84
USB1-213ENST00000566292 GNL2Q13823 731 aaKnown RBP20.29■□□□□ 0.84
USB1-213ENST00000566292 SLC27A1Q6PCB7 646 aa20.29■□□□□ 0.84
USB1-213ENST00000566292 PADI6Q6TGC4 694 aa20.29■□□□□ 0.84
USB1-213ENST00000566292 PPP4R3CPQ6ZMV5 832 aa20.29■□□□□ 0.84
USB1-213ENST00000566292 TAS1R1Q7RTX1 841 aa20.29■□□□□ 0.84
USB1-213ENST00000566292 FZD8Q9H461 694 aa20.29■□□□□ 0.84
USB1-213ENST00000566292 STK39Q9UEW8 545 aa20.29■□□□□ 0.84
USB1-213ENST00000566292 ARHGEF35A5YM69 484 aa20.28■□□□□ 0.84
USB1-213ENST00000566292 TTLL13PA6NNM8 815 aa20.28■□□□□ 0.84
USB1-213ENST00000566292 SOD2P04179 222 aa20.28■□□□□ 0.84
USB1-213ENST00000566292 CNPP09543 421 aaKnown RBP20.28■□□□□ 0.84
USB1-213ENST00000566292 CYP11B2P19099 503 aa20.28■□□□□ 0.84
USB1-213ENST00000566292 TOB1P50616 345 aaPredicted RBP20.28■□□□□ 0.84
USB1-213ENST00000566292 FXR2P51116 673 aaKnown RBP eCLIP20.28■□□□□ 0.84
USB1-213ENST00000566292 CLCN4P51793 760 aa20.28■□□□□ 0.84
USB1-213ENST00000566292 RNF168Q8IYW5 571 aaPredicted RBP20.28■□□□□ 0.84
USB1-213ENST00000566292 NECTIN4Q96NY8 510 aa20.28■□□□□ 0.84
USB1-213ENST00000566292 HERC2P3Q9BVR0 1158 aa20.28■□□□□ 0.84
USB1-213ENST00000566292 PRMT7Q9NVM4 692 aaPredicted RBP20.28■□□□□ 0.84
USB1-213ENST00000566292 NOL7Q9UMY1 257 aaKnown RBP20.28■□□□□ 0.84
USB1-213ENST00000566292 MTCL1Q9Y4B5 1905 aaKnown RBP20.27■□□□□ 0.84
USB1-213ENST00000566292 TRIP11Q15643 1979 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 KMT2EQ8IZD2 1858 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 TMEM221A6NGB7 291 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 C2CD4DB7Z1M9 353 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 M0R296 226 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 MUTP22033 750 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 CCT6AP40227 531 aaKnown RBP20.27■□□□□ 0.84
USB1-213ENST00000566292 MTHFRP42898 656 aa20.27■□□□□ 0.84
USB1-213ENST00000566292 PTPN21Q16825 1174 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms