RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 TSEN34Q9BSV6 310 aaKnown RBP20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 VPS16Q9H269 839 aa20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 SETD4Q9NVD3 440 aa20.87■□□□□ 0.93
CSPG4P13-201ENST00000565545 SCN10AQ9Y5Y9 1956 aa20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 SMIM35A0A1B0GVV1 85 aa20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 MYADML2A6NDP7 307 aa20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 LGALS16A8MUM7 142 aa20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 KIAA0391O15091 583 aaKnown RBP20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 MAPK13O15264 365 aa20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 ACLYP53396 1101 aa20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 IRX5P78411 483 aaPredicted RBP20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 NFRKBQ6P4R8 1299 aa20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 TAS1R3Q7RTX0 852 aa20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 IFNLR1Q8IU57 520 aaPredicted RBP20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 RNF149Q8NC42 400 aa20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 NOC4LQ9BVI4 516 aaKnown RBP20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 INTS13Q9NVM9 706 aa20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 ARMCX3Q9UH62 379 aaPredicted RBP20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 FRMD4BQ9Y2L6 1034 aa20.86■□□□□ 0.93
CSPG4P13-201ENST00000565545 LTBP2Q14767 1821 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 C17orf102A2RUQ5 167 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 CABYRO75952 493 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 PTMAP06454 111 aaKnown RBP20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 SRGAP2CP0DJJ0 459 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 GARTP22102 1010 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 HOXC8P31273 242 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 PHKA2P46019 1235 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 PTENP60484 403 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 ADAM17P78536 824 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 VWA3BQ502W6 1294 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 HS1BP3Q53T59 392 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 SLFN12LQ6IEE8 588 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 C7orf31Q8N865 590 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 VTI1AQ96AJ9 217 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 EEF2KMTQ96G04 330 aa20.85■□□□□ 0.93
CSPG4P13-201ENST00000565545 HNRNPDLO14979 420 aaKnown RBP20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 FAAP100Q0VG06 881 aa20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 CEP135Q66GS9 1140 aa20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 CCSAPQ6IQ19 270 aaPredicted RBP20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 ARMCX5Q6P1M9 558 aa20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 ZPBP2Q6X784 338 aa20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 ZNF410Q86VK4 478 aa20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 TRIM59Q8IWR1 403 aa20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 XXYLT1Q8NBI6 393 aa20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 SPC24Q8NBT2 197 aa20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 BICD1Q96G01 975 aa20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 TOX2Q96NM4 488 aa20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 CCDC113Q9H0I3 377 aa20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 AKT3Q9Y243 479 aa20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 STYXL1Q9Y6J8 313 aa20.84■□□□□ 0.93
CSPG4P13-201ENST00000565545 ITIH6Q6UXX5 1313 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 TMEM265A0A087WTH1 108 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 A0A1W2PQC6 194 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 MOXD2PA6NHM9 499 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 EXOC3O60645 756 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 AKAP3O75969 853 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 PBX1P40424 430 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 LIG4P49917 911 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 UBXN1Q04323 297 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 KCNA10Q16322 511 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 MAPK6Q16659 721 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 FKBP15Q5T1M5 1219 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 SPECC1LQ69YQ0 1117 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 ANKRD33Q7Z3H0 272 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 TMC6Q7Z403 805 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 SESTD1Q86VW0 696 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 FAM186BQ8IYM0 893 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 KIAA0319LQ8IZA0 1049 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 TRIM44Q96DX7 344 aaPredicted RBP20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 GLT1D1Q96MS3 346 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 MRPL4Q9BYD3 311 aaKnown RBP20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 NDST4Q9H3R1 872 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 HSPBP1Q9NZL4 362 aa20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.83■□□□□ 0.93
CSPG4P13-201ENST00000565545 UNC80Q8N2C7 3258 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 ANKRD63C9JTQ0 380 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 TEX33O43247 280 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 RPLP2P05387 115 aaKnown RBP20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 ASGR1P07306 291 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 CYP2C9P11712 490 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 CYP2J2P51589 502 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 GSDMDP57764 484 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 CHMP4BP1P59074 171 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 FAM187BQ17R55 369 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 MIIPQ5JXC2 388 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 CXCL17Q6UXB2 119 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 NME8Q8N427 588 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 NLRP4Q96MN2 994 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 IKZF4Q9H2S9 585 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 FZD8Q9H461 694 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 KIAA1586Q9HCI6 787 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 PRMT7Q9NVM4 692 aaPredicted RBP20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 HDAC6Q9UBN7 1215 aa20.82■□□□□ 0.92
CSPG4P13-201ENST00000565545 LAMA2P24043 3122 aaKnown RBP20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 PES1O00541 588 aaKnown RBP20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 ACKR2O00590 384 aa20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 TIMP1P01033 207 aa20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 PRKCBP05771 671 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms