RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 CSRNP2Q9H175 543 aa26.38■■□□□ 1.81
RAB40C-209ENST00000565511 PRG3Q9Y2Y8 225 aaPredicted RBP26.38■■□□□ 1.81
RAB40C-209ENST00000565511 KMT2EQ8IZD2 1858 aa26.38■■□□□ 1.81
RAB40C-209ENST00000565511 ARL5CA6NH57 179 aa26.37■■□□□ 1.81
RAB40C-209ENST00000565511 TTLL13PA6NNM8 815 aa26.37■■□□□ 1.81
RAB40C-209ENST00000565511 SCNN1GP51170 649 aa26.37■■□□□ 1.81
RAB40C-209ENST00000565511 POU5F1BQ06416 359 aa26.37■■□□□ 1.81
RAB40C-209ENST00000565511 TFDP1Q14186 410 aa26.37■■□□□ 1.81
RAB40C-209ENST00000565511 NOTUMQ6P988 496 aa26.37■■□□□ 1.81
RAB40C-209ENST00000565511 TRIM67Q6ZTA4 783 aa26.37■■□□□ 1.81
RAB40C-209ENST00000565511 TAS1R1Q7RTX1 841 aa26.37■■□□□ 1.81
RAB40C-209ENST00000565511 COLGALT2Q8IYK4 626 aa26.37■■□□□ 1.81
RAB40C-209ENST00000565511 LLPHQ9BRT6 129 aaKnown RBP26.37■■□□□ 1.81
RAB40C-209ENST00000565511 TMEM175Q9BSA9 504 aa26.37■■□□□ 1.81
RAB40C-209ENST00000565511 ADAM7Q9H2U9 754 aa26.37■■□□□ 1.81
RAB40C-209ENST00000565511 WDFY4Q6ZS81 3184 aa26.37■■□□□ 1.81
RAB40C-209ENST00000565511 TMEM221A6NGB7 291 aa26.36■■□□□ 1.81
RAB40C-209ENST00000565511 M0R296 226 aa26.36■■□□□ 1.81
RAB40C-209ENST00000565511 LILRB3O75022 631 aa26.36■■□□□ 1.81
RAB40C-209ENST00000565511 OR52Z1P0C646 297 aa26.36■■□□□ 1.81
RAB40C-209ENST00000565511 AXLP30530 894 aa26.36■■□□□ 1.81
RAB40C-209ENST00000565511 DSC1Q08554 894 aa26.36■■□□□ 1.81
RAB40C-209ENST00000565511 SAFBQ15424 915 aaKnown RBP eCLIP26.36■■□□□ 1.81
RAB40C-209ENST00000565511 ECM1Q16610 540 aa26.36■■□□□ 1.81
RAB40C-209ENST00000565511 TPRNQ4KMQ1 711 aa26.36■■□□□ 1.81
RAB40C-209ENST00000565511 FBXO18Q8NFZ0 1043 aa26.36■■□□□ 1.81
RAB40C-209ENST00000565511 CCDC51Q96ER9 411 aa26.36■■□□□ 1.81
RAB40C-209ENST00000565511 CCDC43Q96MW1 224 aaKnown RBP26.36■■□□□ 1.81
RAB40C-209ENST00000565511 NFKBIZQ9BYH8 718 aa26.36■■□□□ 1.81
RAB40C-209ENST00000565511 TUFT1Q9NNX1 390 aa26.36■■□□□ 1.81
RAB40C-209ENST00000565511 C2CD4DB7Z1M9 353 aa26.35■■□□□ 1.81
RAB40C-209ENST00000565511 NPTXRO95502 500 aa26.35■■□□□ 1.81
RAB40C-209ENST00000565511 EFEMP2O95967 443 aa26.35■■□□□ 1.81
RAB40C-209ENST00000565511 EDN1P05305 212 aa26.35■■□□□ 1.81
RAB40C-209ENST00000565511 TTC38Q5R3I4 469 aa26.35■■□□□ 1.81
RAB40C-209ENST00000565511 C4orf32Q8N8J7 132 aa26.35■■□□□ 1.81
RAB40C-209ENST00000565511 GSTCDQ8NEC7 633 aa26.35■■□□□ 1.81
RAB40C-209ENST00000565511 KLHL5Q96PQ7 755 aa26.35■■□□□ 1.81
RAB40C-209ENST00000565511 POLR3CQ9BUI4 534 aaPredicted RBP26.35■■□□□ 1.81
RAB40C-209ENST00000565511 FOXP1Q9H334 677 aaPredicted RBP26.35■■□□□ 1.81
RAB40C-209ENST00000565511 TSHZ2Q9NRE2 1034 aa26.35■■□□□ 1.81
RAB40C-209ENST00000565511 USP20Q9Y2K6 914 aa26.35■■□□□ 1.81
RAB40C-209ENST00000565511 FAN1Q9Y2M0 1017 aa26.35■■□□□ 1.81
RAB40C-209ENST00000565511 CNPP09543 421 aaKnown RBP26.34■■□□□ 1.81
RAB40C-209ENST00000565511 XRCC6P12956 609 aaKnown RBP eCLIP26.34■■□□□ 1.81
RAB40C-209ENST00000565511 AKAP5P24588 427 aa26.34■■□□□ 1.81
RAB40C-209ENST00000565511 HOXD11P31277 338 aaPredicted RBP26.34■■□□□ 1.81
RAB40C-209ENST00000565511 PCBP1Q15365 356 aaKnown RBP eCLIP26.34■■□□□ 1.81
RAB40C-209ENST00000565511 CNNM3Q8NE01 707 aa26.34■■□□□ 1.81
RAB40C-209ENST00000565511 FAM193BQ96PV7 902 aaPredicted RBP26.34■■□□□ 1.81
RAB40C-209ENST00000565511 KANSL3Q9P2N6 904 aa26.34■■□□□ 1.81
RAB40C-209ENST00000565511 CACNG4Q9UBN1 327 aa26.34■■□□□ 1.81
RAB40C-209ENST00000565511 DBR1Q9UK59 544 aaKnown RBP26.34■■□□□ 1.81
RAB40C-209ENST00000565511 PIEZO1Q92508 2521 aa26.34■■□□□ 1.81
RAB40C-209ENST00000565511 LRRIQ4A6NIV6 560 aa26.33■■□□□ 1.81
RAB40C-209ENST00000565511 EIF5BO60841 1220 aaKnown RBP26.33■■□□□ 1.81
RAB40C-209ENST00000565511 PTPN21Q16825 1174 aa26.33■■□□□ 1.81
RAB40C-209ENST00000565511 CDCA2Q69YH5 1023 aaPredicted RBP26.33■■□□□ 1.81
RAB40C-209ENST00000565511 RNF168Q8IYW5 571 aaPredicted RBP26.33■■□□□ 1.81
RAB40C-209ENST00000565511 FBXL18Q96ME1 805 aa26.33■■□□□ 1.81
RAB40C-209ENST00000565511 HERC2P3Q9BVR0 1158 aa26.33■■□□□ 1.81
RAB40C-209ENST00000565511 POLD4Q9HCU8 107 aa26.33■■□□□ 1.81
RAB40C-209ENST00000565511 CARNS1A5YM72 827 aa26.32■■□□□ 1.8
RAB40C-209ENST00000565511 ALDH2P05091 517 aa26.32■■□□□ 1.8
RAB40C-209ENST00000565511 OR1G1P47890 313 aa26.32■■□□□ 1.8
RAB40C-209ENST00000565511 CLCN4P51793 760 aa26.32■■□□□ 1.8
RAB40C-209ENST00000565511 ITIH3Q06033 890 aa26.32■■□□□ 1.8
RAB40C-209ENST00000565511 BMS1Q14692 1282 aaKnown RBP26.32■■□□□ 1.8
RAB40C-209ENST00000565511 NOSTRINQ8IVI9 506 aa26.32■■□□□ 1.8
RAB40C-209ENST00000565511 RABGGTAQ92696 567 aa26.32■■□□□ 1.8
RAB40C-209ENST00000565511 ASIC4Q96FT7 647 aa26.32■■□□□ 1.8
RAB40C-209ENST00000565511 CXCL16Q9H2A7 254 aa26.32■■□□□ 1.8
RAB40C-209ENST00000565511 SMOC2Q9H3U7 446 aa26.32■■□□□ 1.8
RAB40C-209ENST00000565511 DZANK1Q9NVP4 752 aa26.32■■□□□ 1.8
RAB40C-209ENST00000565511 KLK14Q9P0G3 267 aa26.32■■□□□ 1.8
RAB40C-209ENST00000565511 C2CD2LO14523 706 aa26.31■■□□□ 1.8
RAB40C-209ENST00000565511 SOD2P04179 222 aa26.31■■□□□ 1.8
RAB40C-209ENST00000565511 RPA1P27694 616 aa26.31■■□□□ 1.8
RAB40C-209ENST00000565511 TOB1P50616 345 aaPredicted RBP26.31■■□□□ 1.8
RAB40C-209ENST00000565511 GIT2Q14161 759 aa26.31■■□□□ 1.8
RAB40C-209ENST00000565511 KIAA1841Q6NSI8 718 aa26.31■■□□□ 1.8
RAB40C-209ENST00000565511 CES5AQ6NT32 575 aa26.31■■□□□ 1.8
RAB40C-209ENST00000565511 TMC5Q6UXY8 1006 aa26.31■■□□□ 1.8
RAB40C-209ENST00000565511 PPP4R3CPQ6ZMV5 832 aa26.31■■□□□ 1.8
RAB40C-209ENST00000565511 B3GALT6Q96L58 329 aa26.31■■□□□ 1.8
RAB40C-209ENST00000565511 ZSCAN31Q96LW9 406 aaPredicted RBP26.31■■□□□ 1.8
RAB40C-209ENST00000565511 NACC1Q96RE7 527 aa26.31■■□□□ 1.8
RAB40C-209ENST00000565511 UBN1Q9NPG3 1134 aa26.31■■□□□ 1.8
RAB40C-209ENST00000565511 GIT1Q9Y2X7 761 aa26.31■■□□□ 1.8
RAB40C-209ENST00000565511 A0A1B0GUA9 196 aa26.3■■□□□ 1.8
RAB40C-209ENST00000565511 HMGN5P82970 282 aaKnown RBP26.3■■□□□ 1.8
RAB40C-209ENST00000565511 SLC27A1Q6PCB7 646 aa26.3■■□□□ 1.8
RAB40C-209ENST00000565511 PADI6Q6TGC4 694 aa26.3■■□□□ 1.8
RAB40C-209ENST00000565511 BMP8AQ7Z5Y6 402 aa26.3■■□□□ 1.8
RAB40C-209ENST00000565511 MCPH1Q8NEM0 835 aa26.3■■□□□ 1.8
RAB40C-209ENST00000565511 FZD8Q9H461 694 aa26.3■■□□□ 1.8
RAB40C-209ENST00000565511 SH2B1Q9NRF2 756 aaPredicted RBP26.3■■□□□ 1.8
RAB40C-209ENST00000565511 MTHFRP42898 656 aa26.29■■□□□ 1.8
RAB40C-209ENST00000565511 RBM25P49756 843 aaKnown RBP26.29■■□□□ 1.8
RAB40C-209ENST00000565511 SIGLEC14Q08ET2 396 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms