RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 SMAD5Q99717 465 aaKnown RBP5.72□□□□□ -1.49
PALB2-203ENST00000565038 ENKD1Q9H0I2 346 aa5.72□□□□□ -1.49
PALB2-203ENST00000565038 MKS1Q9NXB0 559 aa5.72□□□□□ -1.49
PALB2-203ENST00000565038 NOP58Q9Y2X3 529 aaKnown RBP5.72□□□□□ -1.49
PALB2-203ENST00000565038 PCDHGA2Q9Y5H1 932 aa5.72□□□□□ -1.49
PALB2-203ENST00000565038 RPTORQ8N122 1335 aa5.72□□□□□ -1.49
PALB2-203ENST00000565038 AKR1B10O60218 316 aa5.71□□□□□ -1.5
PALB2-203ENST00000565038 AGXTP21549 392 aa5.71□□□□□ -1.5
PALB2-203ENST00000565038 HIBADHP31937 336 aaKnown RBP5.71□□□□□ -1.5
PALB2-203ENST00000565038 SLC5A3P53794 718 aa5.71□□□□□ -1.5
PALB2-203ENST00000565038 WNT3AP56704 352 aa5.71□□□□□ -1.5
PALB2-203ENST00000565038 PRKD1Q15139 912 aaPredicted RBP5.71□□□□□ -1.5
PALB2-203ENST00000565038 C19orf54Q5BKX5 351 aa5.71□□□□□ -1.5
PALB2-203ENST00000565038 MUM1L1Q5H9M0 696 aa5.71□□□□□ -1.5
PALB2-203ENST00000565038 SPDYAQ5MJ70 313 aa5.71□□□□□ -1.5
PALB2-203ENST00000565038 RPUSD2Q8IZ73 545 aaKnown RBP5.71□□□□□ -1.5
PALB2-203ENST00000565038 EDAQ92838 391 aa5.71□□□□□ -1.5
PALB2-203ENST00000565038 FAXDC2Q96IV6 333 aa5.71□□□□□ -1.5
PALB2-203ENST00000565038 MPHOSPH9Q99550 1183 aa5.71□□□□□ -1.5
PALB2-203ENST00000565038 BRINP2Q9C0B6 783 aa5.71□□□□□ -1.5
PALB2-203ENST00000565038 HOMER2Q9NSB8 354 aa5.71□□□□□ -1.5
PALB2-203ENST00000565038 TSC22D4Q9Y3Q8 395 aa5.71□□□□□ -1.5
PALB2-203ENST00000565038 hCG_2014768A0A024R1R8 64 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 TRIM75PA6NK02 468 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 ADCY6O43306 1168 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 HOXA3O43365 443 aaPredicted RBP5.7□□□□□ -1.5
PALB2-203ENST00000565038 XPOTO43592 962 aaKnown RBP5.7□□□□□ -1.5
PALB2-203ENST00000565038 PCDHGA12O60330 932 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 ITGA10O75578 1167 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 INSRRP14616 1297 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 GSPT1P15170 499 aaKnown RBP5.7□□□□□ -1.5
PALB2-203ENST00000565038 GYPEP15421 78 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 PCBP2Q15366 365 aaKnown RBP eCLIP5.7□□□□□ -1.5
PALB2-203ENST00000565038 MBNL2Q5VZF2 373 aaKnown RBP5.7□□□□□ -1.5
PALB2-203ENST00000565038 LILRA3Q8N6C8 439 aaPredicted RBP5.7□□□□□ -1.5
PALB2-203ENST00000565038 MB21D1Q8N884 522 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 GPR156Q8NFN8 814 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 FBXO18Q8NFZ0 1043 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 MDM1Q8TC05 714 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 SH3RF3Q8TEJ3 882 aaPredicted RBP5.7□□□□□ -1.5
PALB2-203ENST00000565038 IL17RAQ96F46 866 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 PAWRQ96IZ0 340 aaKnown RBP5.7□□□□□ -1.5
PALB2-203ENST00000565038 CDK5RAP1Q96SZ6 601 aaKnown RBP5.7□□□□□ -1.5
PALB2-203ENST00000565038 ADI1Q9BV57 179 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 GREM2Q9H772 168 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 ZNF277Q9NRM2 450 aaPredicted RBP5.7□□□□□ -1.5
PALB2-203ENST00000565038 GPRC5DQ9NZD1 345 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 SCOCQ9UIL1 159 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 ZBTB21Q9ULJ3 1066 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 PCDHGA9Q9Y5G4 932 aaKnown RBP5.7□□□□□ -1.5
PALB2-203ENST00000565038 PCDHGA8Q9Y5G5 932 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 PCDHGA7Q9Y5G6 932 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 PCDHGA6Q9Y5G7 932 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 PCDHGA3Q9Y5H0 932 aa5.7□□□□□ -1.5
PALB2-203ENST00000565038 ZMYM3Q14202 1370 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 RBP3P10745 1247 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 GZMKP49863 264 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 ANAPC15P60006 121 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 PPP3CAQ08209 521 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 MALLQ13021 153 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 MRPL49Q13405 166 aaKnown RBP5.69□□□□□ -1.5
PALB2-203ENST00000565038 NOMO1Q15155 1222 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 ANO4Q32M45 955 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 BRDTQ58F21 947 aaPredicted RBP5.69□□□□□ -1.5
PALB2-203ENST00000565038 SPRED1Q7Z699 444 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 REPS2Q8NFH8 660 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 ZNF480Q8WV37 535 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 JADE3Q92613 823 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 EXTL1Q92935 676 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 MIEF2Q96C03 454 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 PGBD4Q96DM1 585 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 FUBP3Q96I24 572 aaKnown RBP eCLIP5.69□□□□□ -1.5
PALB2-203ENST00000565038 CDC5LQ99459 802 aaKnown RBP5.69□□□□□ -1.5
PALB2-203ENST00000565038 ASPSCR1Q9BZE9 553 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 DNM3Q9UQ16 869 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 TNKSO95271 1327 aa5.69□□□□□ -1.5
PALB2-203ENST00000565038 SHTN1A0MZ66 631 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 KLHL33A6NCF5 533 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 FZD9O00144 591 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 PLSCR1O15162 318 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 GNAT2P19087 354 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 HK1P19367 917 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 MCAMP43121 646 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 SCNN1GP51170 649 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 APBA1Q02410 837 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 PTPN21Q16825 1174 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 MST1LQ2TV78 715 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 USP39Q53GS9 565 aaKnown RBP5.68□□□□□ -1.5
PALB2-203ENST00000565038 PRAMEF14Q5SWL7 426 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 MFSD5Q6N075 450 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 Q6ZRM9 215 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 Q6ZVL8 140 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 XYLT1Q86Y38 959 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 GSPT2Q8IYD1 628 aaKnown RBP5.68□□□□□ -1.5
PALB2-203ENST00000565038 ANKRD35Q8N283 1001 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 ATXN2LQ8WWM7 1075 aaKnown RBP5.68□□□□□ -1.5
PALB2-203ENST00000565038 CPPED1Q9BRF8 314 aaPredicted RBP5.68□□□□□ -1.5
PALB2-203ENST00000565038 RBM12Q9NTZ6 932 aaKnown RBP5.68□□□□□ -1.5
PALB2-203ENST00000565038 TRPS1Q9UHF7 1281 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 GIT1Q9Y2X7 761 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms