RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 EPM2AIP1Q7L775 607 aaPredicted RBP20.63■□□□□ 0.89
RAB40C-207ENST00000563109 MYOCDQ8IZQ8 938 aa20.63■□□□□ 0.89
RAB40C-207ENST00000563109 TRIML1Q8N9V2 468 aa20.63■□□□□ 0.89
RAB40C-207ENST00000563109 GLIS3Q8NEA6 775 aa20.63■□□□□ 0.89
RAB40C-207ENST00000563109 LINC01599Q8WXQ3 324 aa20.63■□□□□ 0.89
RAB40C-207ENST00000563109 PDZD7Q9H5P4 517 aa20.63■□□□□ 0.89
RAB40C-207ENST00000563109 ANKFY1Q9P2R3 1169 aa20.63■□□□□ 0.89
RAB40C-207ENST00000563109 TNFSF13BQ9Y275 285 aa20.63■□□□□ 0.89
RAB40C-207ENST00000563109 A0A1B0GUA9 196 aa20.62■□□□□ 0.89
RAB40C-207ENST00000563109 TOM1L1O75674 476 aa20.62■□□□□ 0.89
RAB40C-207ENST00000563109 PIGRP01833 764 aa20.62■□□□□ 0.89
RAB40C-207ENST00000563109 WDR5P61964 334 aaKnown RBP20.62■□□□□ 0.89
RAB40C-207ENST00000563109 STIM1Q13586 685 aa20.62■□□□□ 0.89
RAB40C-207ENST00000563109 BMT2Q1RMZ1 405 aa20.62■□□□□ 0.89
RAB40C-207ENST00000563109 DCAF4L1Q3SXM0 396 aa20.62■□□□□ 0.89
RAB40C-207ENST00000563109 ZNF568Q3ZCX4 644 aa20.62■□□□□ 0.89
RAB40C-207ENST00000563109 CAVIN1Q6NZI2 390 aaKnown RBP20.62■□□□□ 0.89
RAB40C-207ENST00000563109 SLC24A5Q71RS6 500 aa20.62■□□□□ 0.89
RAB40C-207ENST00000563109 ZNF507Q8TCN5 953 aa20.62■□□□□ 0.89
RAB40C-207ENST00000563109 SCFD1Q8WVM8 642 aa20.62■□□□□ 0.89
RAB40C-207ENST00000563109 RNPC3Q96LT9 517 aaKnown RBP20.62■□□□□ 0.89
RAB40C-207ENST00000563109 TCHPQ9BT92 498 aa20.62■□□□□ 0.89
RAB40C-207ENST00000563109 USP20Q9Y2K6 914 aa20.62■□□□□ 0.89
RAB40C-207ENST00000563109 GDAQ9Y2T3 454 aa20.62■□□□□ 0.89
RAB40C-207ENST00000563109 PDE4DIPQ5VU43 2346 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 TTLL13PA6NNM8 815 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 RBAK-RBAKDNI3L0D1 243 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 BIN1O00499 593 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 ENPP3O14638 875 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 NPTXRO95502 500 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 IBSPP21815 317 aaPredicted RBP20.61■□□□□ 0.89
RAB40C-207ENST00000563109 BMP8BP34820 402 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 MPZL3Q6UWV2 235 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 CDR2LQ86X02 465 aaPredicted RBP20.61■□□□□ 0.89
RAB40C-207ENST00000563109 NELFCDQ8IXH7 590 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 HACE1Q8IYU2 909 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 TRAIPQ9BWF2 469 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 FAM105AQ9NUU6 356 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 LRFN2Q9ULH4 789 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 SLC4A7Q9Y6M7 1214 aa20.61■□□□□ 0.89
RAB40C-207ENST00000563109 TNRC18O15417 2968 aaPredicted RBP20.61■□□□□ 0.89
RAB40C-207ENST00000563109 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.6■□□□□ 0.89
RAB40C-207ENST00000563109 C9IYK1 514 aa20.6■□□□□ 0.89
RAB40C-207ENST00000563109 PPP1R2P41236 205 aa20.6■□□□□ 0.89
RAB40C-207ENST00000563109 KCNA1Q09470 495 aa20.6■□□□□ 0.89
RAB40C-207ENST00000563109 NOLC1Q14978 699 aaKnown RBP eCLIP20.6■□□□□ 0.89
RAB40C-207ENST00000563109 ISM2Q6H9L7 571 aa20.6■□□□□ 0.89
RAB40C-207ENST00000563109 SLFN12LQ6IEE8 588 aa20.6■□□□□ 0.89
RAB40C-207ENST00000563109 HS2ST1Q7LGA3 356 aa20.6■□□□□ 0.89
RAB40C-207ENST00000563109 GUF1Q8N442 669 aaKnown RBP20.6■□□□□ 0.89
RAB40C-207ENST00000563109 SLC9A7Q96T83 725 aa20.6■□□□□ 0.89
RAB40C-207ENST00000563109 GBP3Q9H0R5 595 aa20.6■□□□□ 0.89
RAB40C-207ENST00000563109 ZMYM2Q9UBW7 1377 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 A0A0U1RQF3 1178 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 CLDN3O15551 220 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 STAG3L1P0CL83 205 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 MCF2P10911 925 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 HARSP12081 509 aaKnown RBP20.59■□□□□ 0.89
RAB40C-207ENST00000563109 MORC3Q14149 939 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 SHHQ15465 462 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 KNOP1Q1ED39 458 aaKnown RBP20.59■□□□□ 0.89
RAB40C-207ENST00000563109 C9orf50Q5SZB4 431 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 UBXN11Q5T124 520 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 EEF1DP3Q658K8 133 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 CHRDL2Q6WN34 429 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.59■□□□□ 0.89
RAB40C-207ENST00000563109 ZBTB33Q86T24 672 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 RTN4RL1Q86UN2 441 aaPredicted RBP20.59■□□□□ 0.89
RAB40C-207ENST00000563109 NPAS4Q8IUM7 802 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 SMYD4Q8IYR2 804 aaPredicted RBP20.59■□□□□ 0.89
RAB40C-207ENST00000563109 GOLGA5Q8TBA6 731 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 PGBD4Q96DM1 585 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 EIF2AQ9BY44 585 aaKnown RBP20.59■□□□□ 0.89
RAB40C-207ENST00000563109 CDT1Q9H211 546 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 TMEM63CQ9P1W3 806 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 MAPK8IP1Q9UQF2 711 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 PCDHB7Q9Y5E2 793 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 PCDHB2Q9Y5E7 798 aa20.59■□□□□ 0.89
RAB40C-207ENST00000563109 PROZP22891 400 aa20.58■□□□□ 0.89
RAB40C-207ENST00000563109 DEFB103AP81534 67 aa20.58■□□□□ 0.89
RAB40C-207ENST00000563109 MCL1Q07820 350 aa20.58■□□□□ 0.89
RAB40C-207ENST00000563109 COBLL1Q53SF7 1204 aa20.58■□□□□ 0.89
RAB40C-207ENST00000563109 PRPF38BQ5VTL8 546 aaKnown RBP20.58■□□□□ 0.89
RAB40C-207ENST00000563109 ECHDC2Q86YB7 292 aa20.58■□□□□ 0.89
RAB40C-207ENST00000563109 RNF169Q8NCN4 708 aa20.58■□□□□ 0.89
RAB40C-207ENST00000563109 POMGNT1Q8WZA1 660 aa20.58■□□□□ 0.89
RAB40C-207ENST00000563109 ELAC1Q9H777 363 aaKnown RBP20.58■□□□□ 0.89
RAB40C-207ENST00000563109 PTPRHQ9HD43 1115 aa20.58■□□□□ 0.89
RAB40C-207ENST00000563109 TMEM161AQ9NX61 479 aa20.58■□□□□ 0.89
RAB40C-207ENST00000563109 CXXC1Q9P0U4 656 aaPredicted RBP20.58■□□□□ 0.89
RAB40C-207ENST00000563109 CGNQ9P2M7 1197 aaKnown RBP20.58■□□□□ 0.89
RAB40C-207ENST00000563109 PTPRSQ13332 1948 aa20.58■□□□□ 0.88
RAB40C-207ENST00000563109 SNRPFP62306 86 aaKnown RBP20.57■□□□□ 0.88
RAB40C-207ENST00000563109 KYAT1Q16773 422 aa20.57■□□□□ 0.88
RAB40C-207ENST00000563109 RASIP1Q5U651 963 aa20.57■□□□□ 0.88
RAB40C-207ENST00000563109 ARMCX5Q6P1M9 558 aa20.57■□□□□ 0.88
RAB40C-207ENST00000563109 SLC39A4Q6P5W5 647 aa20.57■□□□□ 0.88
RAB40C-207ENST00000563109 SASS6Q6UVJ0 657 aa20.57■□□□□ 0.88
RAB40C-207ENST00000563109 RBM43Q6ZSC3 357 aaKnown RBP20.57■□□□□ 0.88
RAB40C-207ENST00000563109 TDHQ8IZJ6 230 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms