RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	SLC5A5	Q92911	643 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	RIT2	Q99578	217 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	HERC2P3	Q9BVR0	1158 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	LRRC2	Q9BYS8	371 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	IFT122	Q9HBG6	1241 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	DISC1	Q9NRI5	854 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	CHST7	Q9NS84	486 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	AGPAT5	Q9NUQ2	364 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	ZDHHC7	Q9NXF8	308 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	DPP7	Q9UHL4	492 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	FBXO4	Q9UKT5	387 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	BRPF3	Q9ULD4	1205 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	VPS9D1	Q9Y2B5	631 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	SSX2IP	Q9Y2D8	614 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	PCDHB2	Q9Y5E7	798 aa		9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	MYH9	P35579	1960 aa	Known RBP	9.37	□□□□□ -0.91
CKLF-208	ENST00000563092	CNTNAP2	Q9UHC6	1331 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092		A0A087WZ62	844 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	NRP1	O14786	923 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	SPTLC1	O15269	473 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	MSH4	O15457	936 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	LILRB5	O75023	590 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	MAF	O75444	373 aa	Predicted RBP	9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	RFPL2	O75678	378 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	ALDH2	P05091	517 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	ADH1A	P07327	375 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	SDHB	P21912	280 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	CDC27	P30260	824 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	HOXA11	P31270	313 aa	Predicted RBP	9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	SFN	P31947	248 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	DSG1	Q02413	1049 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	RNASEL	Q05823	741 aa	Known RBP	9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	DSC1	Q08554	894 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	PRR16	Q569H4	304 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	UBXN11	Q5T124	520 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	CREB3L3	Q68CJ9	461 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	DCLRE1A	Q6PJP8	1040 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	TAS1R1	Q7RTX1	841 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	COLGALT2	Q8IYK4	626 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	GPR161	Q8N6U8	529 aa	Known RBP	9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	RDM1	Q8NG50	284 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	PGBD4	Q96DM1	585 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	FDXACB1	Q9BRP7	624 aa	Predicted RBP	9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	OSBPL6	Q9BZF3	934 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	INO80B	Q9C086	356 aa	Predicted RBP	9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	NT5C3A	Q9H0P0	336 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	PLEKHA4	Q9H4M7	779 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	KANSL3	Q9P2N6	904 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	PIN4	Q9Y237	131 aa	Known RBP	9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	INPP5F	Q9Y2H2	1132 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	FAN1	Q9Y2M0	1017 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	USP24	Q9UPU5	2620 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	WDR81	Q562E7	1941 aa		9.36	□□□□□ -0.91
CKLF-208	ENST00000563092	KIN	O60870	393 aa	Known RBP	9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	PSMD10	O75832	226 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	GLUD1	P00367	558 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	UROD	P06132	367 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	GBP2	P32456	591 aa	Predicted RBP	9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	JAK3	P52333	1124 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	ATXN1	P54253	815 aa	Known RBP	9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	RTN1	Q16799	776 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	LONRF3	Q496Y0	759 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	XKR3	Q5GH77	459 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	SPECC1	Q5M775	1068 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	PPP1R15B	Q5SWA1	713 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	REXO1	Q8N1G1	1221 aa	Known RBP	9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	URGCP	Q8TCY9	931 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	SMG7	Q92540	1137 aa	Known RBP	9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	MBOAT7	Q96N66	472 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	SCLT1	Q96NL6	688 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	PRKD2	Q9BZL6	878 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	FOXQ1	Q9C009	403 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	EPC1	Q9H2F5	836 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	UNC45A	Q9H3U1	944 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	RSAD1	Q9HA92	442 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	FNIP2	Q9P278	1114 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	SUCLA2	Q9P2R7	463 aa	Predicted RBP	9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	SAMM50	Q9Y512	469 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	PCDHGA2	Q9Y5H1	932 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	NUMBL	Q9Y6R0	609 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	NID2	Q14112	1375 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	CACNA1I	Q9P0X4	2223 aa		9.35	□□□□□ -0.91
CKLF-208	ENST00000563092	CHD8	Q9HCK8	2581 aa		9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	PATJ	Q8NI35	1801 aa		9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	KANSL1L	A0AUZ9	987 aa		9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	TMEM150B	A6NC51	233 aa		9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	ZBTB43	O43298	467 aa		9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	LRRN2	O75325	713 aa		9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	SSB	P05455	408 aa	Known RBP eCLIP	9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	NCL	P19338	710 aa	Known RBP	9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	GLUD2	P49448	558 aa		9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	DNM2	P50570	870 aa		9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	USP11	P51784	963 aa		9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	AK2	P54819	239 aa		9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	GPC5	P78333	572 aa		9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	TSGA10IP	Q3SY00	556 aa		9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	ELMSAN1	Q6PJG2	1045 aa		9.34	□□□□□ -0.91
CKLF-208	ENST00000563092	RSPO2	Q6UXX9	243 aa	Predicted RBP	9.34	□□□□□ -0.91

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