RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 COASYQ13057 564 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 PRPF4BQ13523 1007 aaKnown RBP14.77□□□□□ -0.05
CDH1-204ENST00000562118 UNC13DQ70J99 1090 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 EPM2AIP1Q7L775 607 aaPredicted RBP14.77□□□□□ -0.05
CDH1-204ENST00000562118 HAUS6Q7Z4H7 955 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 SFR1Q86XK3 245 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 FAM178BQ8IXR5 827 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 CMTR2Q8IYT2 770 aaKnown RBP14.77□□□□□ -0.05
CDH1-204ENST00000562118 MYCT1Q8N699 235 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 CNNM3Q8NE01 707 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 CPB2Q96IY4 423 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 TIGD1Q96MW7 591 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 EIF2AQ9BY44 585 aaKnown RBP14.77□□□□□ -0.05
CDH1-204ENST00000562118 TBX20Q9UMR3 447 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 PCDHB2Q9Y5E7 798 aa14.77□□□□□ -0.05
CDH1-204ENST00000562118 TRIP11Q15643 1979 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 ANK1P16157 1881 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 LCHNA4D1U4 455 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 TLL1O43897 1013 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 KRT18P05783 430 aaKnown RBP14.76□□□□□ -0.05
CDH1-204ENST00000562118 MYOGP15173 224 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 CUL4BQ13620 913 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 ALCAMQ13740 583 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 CLLU1OSQ5K130 101 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 TWF2Q6IBS0 349 aaKnown RBP14.76□□□□□ -0.05
CDH1-204ENST00000562118 AGMOQ6ZNB7 445 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 CEP57L1Q8IYX8 460 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 SPATA20Q8TB22 786 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 STAMQ92783 540 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 TIFAQ96CG3 184 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 CASD1Q96PB1 797 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 MRPL4Q9BYD3 311 aaKnown RBP14.76□□□□□ -0.05
CDH1-204ENST00000562118 FGFBP2Q9BYJ0 223 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 TTYH1Q9H313 450 aaPredicted RBP14.76□□□□□ -0.05
CDH1-204ENST00000562118 IPPQ9Y573 584 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 STYXL1Q9Y6J8 313 aa14.76□□□□□ -0.05
CDH1-204ENST00000562118 LINC01553A4QN01 128 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 K7ENM7 598 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 HOXA2O43364 376 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 GTPBP6O43824 516 aaPredicted RBP14.75□□□□□ -0.05
CDH1-204ENST00000562118 FAM189A1O60320 539 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 GADD45BO75293 160 aaPredicted RBP14.75□□□□□ -0.05
CDH1-204ENST00000562118 TOM1L1O75674 476 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 CA3P07451 260 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 NMT1P30419 496 aaKnown RBP14.75□□□□□ -0.05
CDH1-204ENST00000562118 CASP5P51878 434 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 UBE2HP62256 183 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 TAP1Q03518 808 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 MCL1Q07820 350 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 NCBP1Q09161 790 aaKnown RBP14.75□□□□□ -0.05
CDH1-204ENST00000562118 DPYDQ12882 1025 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 BMT2Q1RMZ1 405 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 DCAF4L1Q3SXM0 396 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 ATF7IP2Q5U623 682 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 EEF1DP3Q658K8 133 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 SLC39A4Q6P5W5 647 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 CCDC65Q8IXS2 484 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 GRAMD1CQ8IYS0 662 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 TMEM117Q9H0C3 514 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 PANK4Q9NVE7 773 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 MSRAQ9UJ68 235 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 PCDHB7Q9Y5E2 793 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 EYSQ5T1H1 3165 aa14.75□□□□□ -0.05
CDH1-204ENST00000562118 UBE4BO95155 1302 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 MEIS3P2A8K0S8 358 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 C5orf67F2Z3F1 127 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 EIF3DO15371 548 aaKnown RBP eCLIP14.74□□□□□ -0.05
CDH1-204ENST00000562118 LIG1P18858 919 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 CASP1P29466 404 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 ERVK-21P61565 698 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 L1TD1Q5T7N2 865 aaKnown RBP14.74□□□□□ -0.05
CDH1-204ENST00000562118 GSTCDQ8NEC7 633 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 TMEM174Q8WUU8 243 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 TARS2Q9BW92 718 aaKnown RBP14.74□□□□□ -0.05
CDH1-204ENST00000562118 HAPLN2Q9GZV7 340 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 CDT1Q9H211 546 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 NKX2-4Q9H2Z4 354 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 NXF3Q9H4D5 531 aaKnown RBP14.74□□□□□ -0.05
CDH1-204ENST00000562118 UBN1Q9NPG3 1134 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 USP20Q9Y2K6 914 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 PLXNA4Q9HCM2 1894 aa14.74□□□□□ -0.05
CDH1-204ENST00000562118 NR1I2O75469 434 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 OFD1O75665 1012 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 RHOBTB3O94955 611 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 PRR29P0C7W0 189 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 MCF2P10911 925 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 FGFR1P11362 822 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 HOXD13P35453 343 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 ASIC1P78348 528 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 STRN3Q13033 797 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 KCNB1Q14721 858 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 ZC2HC1CQ53FD0 456 aaPredicted RBP14.73□□□□□ -0.05
CDH1-204ENST00000562118 XKR4Q5GH76 650 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 HERC4Q5GLZ8 1057 aaPredicted RBP14.73□□□□□ -0.05
CDH1-204ENST00000562118 KANK3Q6NY19 840 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 MPZL3Q6UWV2 235 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 LRRC55Q6ZSA7 311 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 PGBD4Q96DM1 585 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 YME1L1Q96TA2 773 aa14.73□□□□□ -0.05
CDH1-204ENST00000562118 BLZF1Q9H2G9 400 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms