RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 ECM2O94769 699 aaPredicted RBP15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 CETN1Q12798 172 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 MYO1EQ12965 1108 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 ANKRD42Q8N9B4 389 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 ARHGEF2Q92974 986 aaKnown RBP15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 ART4Q93070 314 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 RPS6KC1Q96S38 1066 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 WNT8AQ9H1J5 351 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 PCIF1Q9H4Z3 704 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 TUFT1Q9NNX1 390 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 MLXIPLQ9NP71 852 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 USP15Q9Y4E8 981 aaPredicted RBP15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 F5H6K3 240 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 PEX5P50542 639 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 CACNB3P54284 484 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 ICA1Q05084 483 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 FAM182BQ5T319 152 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 NUGGCQ68CJ6 796 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 FAM196AQ6ZSG2 479 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 SLC13A5Q86YT5 568 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 ARHGEF19Q8IW93 802 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 KIRREL3Q8IZU9 778 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 BTBD6Q96KE9 485 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 DDX23Q9BUQ8 820 aaKnown RBP15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 ECT2Q9H8V3 914 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 DMAC2Q9NW81 257 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 NYAP2Q9P242 653 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 L3MBTL1Q9Y468 752 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 PCDHA3Q9Y5H8 950 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 NRAPQ86VF7 1730 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 EMSYQ7Z589 1322 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 FOCADQ5VW36 1801 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 SUN1O94901 812 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 ECEL1O95672 775 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 RARAP10276 462 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 RFX1P22670 979 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 KCNJ2P63252 427 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 DLG4P78352 724 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 SYDE2Q5VT97 1194 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 MKL1Q969V6 931 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 ROPN1BQ9BZX4 212 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 DNAJC18Q9H819 358 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 ROPN1Q9HAT0 212 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 SEL1LQ9UBV2 794 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 C10orf71Q711Q0 1435 aa15.01□□□□□ -0.01
VPS9D1-202ENST00000561976 TMEM120BA0PK00 339 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 RTN2O75298 545 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 ALAS1P13196 640 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 NQO1P15559 274 aaKnown RBP15□□□□□ -0.01
VPS9D1-202ENST00000561976 CRY2Q49AN0 593 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 TLDC1Q6P9B6 456 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 CRELD2Q6UXH1 353 aaPredicted RBP15□□□□□ -0.01
VPS9D1-202ENST00000561976 CYFIP1Q7L576 1253 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 OTOP1Q7RTM1 612 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 FIZ1Q96SL8 496 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 POP1Q99575 1024 aaKnown RBP15□□□□□ -0.01
VPS9D1-202ENST00000561976 CDC42EP4Q9H3Q1 356 aaKnown RBP15□□□□□ -0.01
VPS9D1-202ENST00000561976 UBE4BO95155 1302 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 GCLMP48507 274 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 RIPK1Q13546 671 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 MFSD5Q6N075 450 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 RNF207Q6ZRF8 634 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 MAEAQ7L5Y9 396 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 CPNE8Q86YQ8 564 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 BANK1Q8NDB2 785 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 LMO3Q8TAP4 145 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 CERKQ8TCT0 537 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 NSMCE1Q8WV22 266 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 TEKT1Q969V4 418 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 THOC1Q96FV9 657 aaKnown RBP15□□□□□ -0.01
VPS9D1-202ENST00000561976 COA1Q9GZY4 146 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 SUGT1Q9Y2Z0 365 aa15□□□□□ -0.01
VPS9D1-202ENST00000561976 SERPINB2P05120 415 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 CREB1P16220 341 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 NCALDP61601 193 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 UBXN2AP68543 259 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 SNX1Q13596 522 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 CRYMQ14894 314 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 DOK7Q18PE1 504 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 TNFAIP8L3Q5GJ75 292 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 TRMT10CQ7L0Y3 403 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 KCTD17Q8N5Z5 321 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 GDAP1Q8TB36 358 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 KLHL29Q96CT2 875 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 ZC3H12CQ9C0D7 883 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 ASIC3Q9UHC3 531 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 G3V3G9 751 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 IGF2BP3O00425 579 aaKnown RBP eCLIP14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 HGSO14964 777 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 GAS7O60861 476 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 GDF11O95390 407 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 SGPL1O95470 568 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 ANP32DO95626 131 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 CFBP00751 764 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 DLATP10515 647 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 ZKSCAN8Q15776 578 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 DCAF8Q5TAQ9 597 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 MIGA2Q7L4E1 593 aa14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 ZNF564Q8TBZ8 553 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-202ENST00000561976 CCHCR1Q8TD31 782 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms