RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 MRPL10Q7Z7H8 261 aaKnown RBP28.09■■■□□ 2.09
NME3-202ENST00000561637 ZNF280BQ86YH2 543 aa28.09■■■□□ 2.09
NME3-202ENST00000561637 SMG8Q8ND04 991 aaKnown RBP28.09■■■□□ 2.09
NME3-202ENST00000561637 TMX3Q96JJ7 454 aa28.09■■■□□ 2.09
NME3-202ENST00000561637 MRPL9Q9BYD2 267 aaKnown RBP28.09■■■□□ 2.09
NME3-202ENST00000561637 RNF39Q9H2S5 420 aa28.09■■■□□ 2.09
NME3-202ENST00000561637 TUFT1Q9NNX1 390 aa28.09■■■□□ 2.09
NME3-202ENST00000561637 TSHZ2Q9NRE2 1034 aa28.09■■■□□ 2.09
NME3-202ENST00000561637 PCDHB6Q9Y5E3 794 aa28.09■■■□□ 2.09
NME3-202ENST00000561637 FAM186AA6NE01 2351 aa28.09■■■□□ 2.09
NME3-202ENST00000561637 BRD1O95696 1058 aa28.08■■■□□ 2.09
NME3-202ENST00000561637 U2AF2P26368 475 aaKnown RBP eCLIP28.08■■■□□ 2.09
NME3-202ENST00000561637 PPM1AP35813 382 aa28.08■■■□□ 2.09
NME3-202ENST00000561637 CDR2LQ86X02 465 aaPredicted RBP28.08■■■□□ 2.09
NME3-202ENST00000561637 TMEM105Q8N8V8 129 aa28.08■■■□□ 2.09
NME3-202ENST00000561637 AUTS2Q8WXX7 1259 aa28.08■■■□□ 2.09
NME3-202ENST00000561637 BSNDQ8WZ55 320 aa28.08■■■□□ 2.09
NME3-202ENST00000561637 POLR3CQ9BUI4 534 aaPredicted RBP28.08■■■□□ 2.09
NME3-202ENST00000561637 POLD4Q9HCU8 107 aa28.08■■■□□ 2.09
NME3-202ENST00000561637 HES2Q9Y543 173 aa28.08■■■□□ 2.09
NME3-202ENST00000561637 SRGAP2BP0DMP2 458 aa28.07■■■□□ 2.08
NME3-202ENST00000561637 SKIP12755 728 aa28.07■■■□□ 2.08
NME3-202ENST00000561637 SLC11A1P49279 550 aa28.07■■■□□ 2.08
NME3-202ENST00000561637 NUBP1P53384 320 aa28.07■■■□□ 2.08
NME3-202ENST00000561637 MXD4Q14582 209 aaPredicted RBP28.07■■■□□ 2.08
NME3-202ENST00000561637 IFNLR1Q8IU57 520 aaPredicted RBP28.07■■■□□ 2.08
NME3-202ENST00000561637 VN1R3Q9BXE9 311 aa28.07■■■□□ 2.08
NME3-202ENST00000561637 PRR23AA6NEV1 266 aa28.06■■■□□ 2.08
NME3-202ENST00000561637 C2CD4DB7Z1M9 353 aa28.06■■■□□ 2.08
NME3-202ENST00000561637 DDHD2O94830 711 aa28.06■■■□□ 2.08
NME3-202ENST00000561637 ERLIN2O94905 339 aa28.06■■■□□ 2.08
NME3-202ENST00000561637 TMC7Q7Z402 723 aa28.06■■■□□ 2.08
NME3-202ENST00000561637 POMKQ9H5K3 350 aa28.06■■■□□ 2.08
NME3-202ENST00000561637 PUF60Q9UHX1 559 aaKnown RBP28.06■■■□□ 2.08
NME3-202ENST00000561637 PP2D1A8MPX8 630 aa28.05■■■□□ 2.08
NME3-202ENST00000561637 GALTP07902 379 aa28.05■■■□□ 2.08
NME3-202ENST00000561637 ARF4P18085 180 aaPredicted RBP28.05■■■□□ 2.08
NME3-202ENST00000561637 TRAPPC10P48553 1259 aa28.05■■■□□ 2.08
NME3-202ENST00000561637 ORC2Q13416 577 aaPredicted RBP28.05■■■□□ 2.08
NME3-202ENST00000561637 TFDP1Q14186 410 aa28.05■■■□□ 2.08
NME3-202ENST00000561637 IL17AQ16552 155 aa28.05■■■□□ 2.08
NME3-202ENST00000561637 RSAD1Q9HA92 442 aa28.05■■■□□ 2.08
NME3-202ENST00000561637 DBR1Q9UK59 544 aaKnown RBP28.05■■■□□ 2.08
NME3-202ENST00000561637 NOL7Q9UMY1 257 aaKnown RBP28.05■■■□□ 2.08
NME3-202ENST00000561637 SORCS3Q9UPU3 1222 aa28.05■■■□□ 2.08
NME3-202ENST00000561637 USP20Q9Y2K6 914 aa28.05■■■□□ 2.08
NME3-202ENST00000561637 IPPQ9Y573 584 aa28.05■■■□□ 2.08
NME3-202ENST00000561637 TTLL13PA6NNM8 815 aa28.04■■■□□ 2.08
NME3-202ENST00000561637 POMCP01189 267 aa28.04■■■□□ 2.08
NME3-202ENST00000561637 XRCC6P12956 609 aaKnown RBP eCLIP28.04■■■□□ 2.086e-11■■■■□ 23.7
NME3-202ENST00000561637 HOXB8P17481 243 aaPredicted RBP28.04■■■□□ 2.08
NME3-202ENST00000561637 RPA1P27694 616 aa28.04■■■□□ 2.08
NME3-202ENST00000561637 NBL1P41271 181 aa28.04■■■□□ 2.08
NME3-202ENST00000561637 ALDH7A1P49419 539 aaKnown RBP28.04■■■□□ 2.08
NME3-202ENST00000561637 FOXK2Q01167 660 aa28.04■■■□□ 2.08
NME3-202ENST00000561637 KRT17Q04695 432 aa28.04■■■□□ 2.08
NME3-202ENST00000561637 RNASELQ05823 741 aaKnown RBP28.04■■■□□ 2.08
NME3-202ENST00000561637 PTGDRQ13258 359 aa28.04■■■□□ 2.08
NME3-202ENST00000561637 PGBD4Q96DM1 585 aa28.04■■■□□ 2.08
NME3-202ENST00000561637 NACC1Q96RE7 527 aa28.04■■■□□ 2.08
NME3-202ENST00000561637 APOL6Q9BWW8 343 aa28.04■■■□□ 2.08
NME3-202ENST00000561637 NR2E1Q9Y466 385 aa28.04■■■□□ 2.08
NME3-202ENST00000561637 C2orf71A6NGG8 1288 aa28.03■■■□□ 2.08
NME3-202ENST00000561637 LRRIQ4A6NIV6 560 aa28.03■■■□□ 2.08
NME3-202ENST00000561637 NCLP19338 710 aaKnown RBP28.03■■■□□ 2.08
NME3-202ENST00000561637 CCT6AP40227 531 aaKnown RBP28.03■■■□□ 2.08
NME3-202ENST00000561637 FXR2P51116 673 aaKnown RBP eCLIP28.03■■■□□ 2.08
NME3-202ENST00000561637 MTMR3Q13615 1198 aa28.03■■■□□ 2.08
NME3-202ENST00000561637 PADI6Q6TGC4 694 aa28.03■■■□□ 2.08
NME3-202ENST00000561637 TMEM169Q96HH4 297 aa28.03■■■□□ 2.08
NME3-202ENST00000561637 IGSF21Q96ID5 467 aa28.03■■■□□ 2.08
NME3-202ENST00000561637 TBC1D32Q96NH3 1257 aa28.03■■■□□ 2.08
NME3-202ENST00000561637 NXF3Q9H4D5 531 aaKnown RBP28.03■■■□□ 2.08
NME3-202ENST00000561637 NGRNQ9NPE2 291 aaKnown RBP28.03■■■□□ 2.08
NME3-202ENST00000561637 GJB2P29033 226 aa28.02■■■□□ 2.08
NME3-202ENST00000561637 CA8P35219 290 aa28.02■■■□□ 2.08
NME3-202ENST00000561637 MCTP1Q6DN14 999 aa28.02■■■□□ 2.08
NME3-202ENST00000561637 UBALD2Q8IYN6 164 aa28.02■■■□□ 2.08
NME3-202ENST00000561637 VPS52Q8N1B4 723 aa28.02■■■□□ 2.08
NME3-202ENST00000561637 ERMNQ8TAM6 284 aa28.02■■■□□ 2.08
NME3-202ENST00000561637 ZFP42Q96MM3 310 aa28.02■■■□□ 2.08
NME3-202ENST00000561637 GAD1Q99259 594 aa28.02■■■□□ 2.08
NME3-202ENST00000561637 ZBP1Q9H171 429 aa28.02■■■□□ 2.08
NME3-202ENST00000561637 CSRNP2Q9H175 543 aa28.02■■■□□ 2.08
NME3-202ENST00000561637 MIOSQ9NXC5 875 aa28.02■■■□□ 2.08
NME3-202ENST00000561637 HCFC2Q9Y5Z7 792 aa28.02■■■□□ 2.08
NME3-202ENST00000561637 ARHGEF35A5YM69 484 aa28.01■■■□□ 2.07
NME3-202ENST00000561637 EDN1P05305 212 aa28.01■■■□□ 2.07
NME3-202ENST00000561637 ASGR2P07307 311 aa28.01■■■□□ 2.07
NME3-202ENST00000561637 WEE2P0C1S8 567 aa28.01■■■□□ 2.07
NME3-202ENST00000561637 ITGA4P13612 1032 aa28.01■■■□□ 2.07
NME3-202ENST00000561637 CDC25AP30304 524 aa28.01■■■□□ 2.07
NME3-202ENST00000561637 MLH1P40692 756 aa28.01■■■□□ 2.07
NME3-202ENST00000561637 POU5F1BQ06416 359 aa28.01■■■□□ 2.07
NME3-202ENST00000561637 NOTUMQ6P988 496 aa28.01■■■□□ 2.07
NME3-202ENST00000561637 MRPL43Q8N983 215 aaKnown RBP28.01■■■□□ 2.07
NME3-202ENST00000561637 URGCPQ8TCY9 931 aa28.01■■■□□ 2.07
NME3-202ENST00000561637 LRWD1Q9UFC0 647 aa28.01■■■□□ 2.07
NME3-202ENST00000561637 CNTNAP2Q9UHC6 1331 aa28■■■□□ 2.07
NME3-202ENST00000561637 F8W810 466 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms