RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 DYNC1I1O14576 645 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 SMPD1P17405 629 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 GCLMP48507 274 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 CLDN10P78369 228 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 CYP27A1Q02318 531 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 LAMTOR4Q0VGL1 99 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 SLC18A3Q16572 532 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 CCDC122Q5T0U0 273 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 TXLNBQ8N3L3 684 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 CCDC102AQ96A19 550 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 C16orf70Q9BSU1 422 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 IFIH1Q9BYX4 1025 aaKnown RBP14.02□□□□□ -0.16
SNX1-211ENST00000560829 LACRTQ9GZZ8 138 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 C2orf40Q9H1Z8 148 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 RNPEPQ9H4A4 650 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 TMEM8AQ9HCN3 771 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 DNAJC12Q9UKB3 198 aa14.02□□□□□ -0.16
SNX1-211ENST00000560829 COL1A2P08123 1366 aa14.02□□□□□ -0.17
SNX1-211ENST00000560829 ZNFX1Q9P2E3 1918 aaKnown RBP14.02□□□□□ -0.17
SNX1-211ENST00000560829 ZNF233A6NK53 670 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 LRRIQ3A6PVS8 624 aaPredicted RBP14.01□□□□□ -0.17
SNX1-211ENST00000560829 F8VZ95 297 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 ASAP2O43150 1006 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 PJA2O43164 708 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 MSCO60682 206 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 C22orf31O95567 290 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 LDHAP00338 332 aaKnown RBP14.01□□□□□ -0.17
SNX1-211ENST00000560829 FERP16591 822 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 STAT1P42224 750 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 POU5F1BQ06416 359 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 SREBF2Q12772 1141 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 KIF5AQ12840 1032 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 ZNF569Q5MCW4 686 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 KRT39Q6A163 491 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 PHLDB3Q6NSJ2 640 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 GJB7Q6PEY0 223 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 LINC01465Q8N7H1 131 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 GPR88Q9GZN0 384 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 SUGCTQ9HAC7 445 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 SUCLA2Q9P2R7 463 aaPredicted RBP14.01□□□□□ -0.17
SNX1-211ENST00000560829 MYH9P35579 1960 aaKnown RBP14.01□□□□□ -0.17
SNX1-211ENST00000560829 A0A0B4J269 797 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 IGHA2P01877 340 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 EDN1P05305 212 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 MAGEA1P43355 309 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 GFPT1Q06210 699 aaPredicted RBP14.01□□□□□ -0.17
SNX1-211ENST00000560829 PSMD6Q15008 389 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 ZBTB8OSQ8IWT0 167 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 SLC35F6Q8N357 371 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 LRRC71Q8N4P6 559 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 HHIPL1Q96JK4 782 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 FAM213AQ9BRX8 229 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 TARS2Q9BW92 718 aaKnown RBP14.01□□□□□ -0.17
SNX1-211ENST00000560829 NFKBIZQ9BYH8 718 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 HAPLN2Q9GZV7 340 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 ZFYVE28Q9HCC9 887 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 TRIM10Q9UDY6 481 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 AGO2Q9UKV8 859 aaKnown RBP14.01□□□□□ -0.17
SNX1-211ENST00000560829 ZHX1Q9UKY1 873 aaPredicted RBP14.01□□□□□ -0.17
SNX1-211ENST00000560829 ZNF215Q9UL58 517 aaPredicted RBP14.01□□□□□ -0.17
SNX1-211ENST00000560829 GUCA1BQ9UMX6 200 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 PLXNA1Q9UIW2 1896 aa14.01□□□□□ -0.17
SNX1-211ENST00000560829 MAGEB2O15479 319 aa14□□□□□ -0.17
SNX1-211ENST00000560829 URI1O94763 535 aaPredicted RBP14□□□□□ -0.17
SNX1-211ENST00000560829 GFPT2O94808 682 aa14□□□□□ -0.17
SNX1-211ENST00000560829 SLU7O95391 586 aaKnown RBP14□□□□□ -0.17
SNX1-211ENST00000560829 MMP3P08254 477 aa14□□□□□ -0.17
SNX1-211ENST00000560829 INSRRP14616 1297 aa14□□□□□ -0.17
SNX1-211ENST00000560829 SOX5P35711 763 aa14□□□□□ -0.17
SNX1-211ENST00000560829 PTK2Q05397 1052 aa14□□□□□ -0.17
SNX1-211ENST00000560829 TFDP1Q14186 410 aa14□□□□□ -0.17
SNX1-211ENST00000560829 DRAP1Q14919 205 aaPredicted RBP14□□□□□ -0.17
SNX1-211ENST00000560829 EFCAB12Q6NXP0 572 aa14□□□□□ -0.17
SNX1-211ENST00000560829 TRAPPC12Q8WVT3 735 aa14□□□□□ -0.17
SNX1-211ENST00000560829 CCDC127Q96BQ5 260 aa14□□□□□ -0.17
SNX1-211ENST00000560829 MRPL4Q9BYD3 311 aaKnown RBP14□□□□□ -0.17
SNX1-211ENST00000560829 LUC7LQ9NQ29 371 aaKnown RBP14□□□□□ -0.17
SNX1-211ENST00000560829 TFR2Q9UP52 801 aa14□□□□□ -0.17
SNX1-211ENST00000560829 SIP14410 1827 aa14□□□□□ -0.17
SNX1-211ENST00000560829 ATP8B3O60423 1300 aa14□□□□□ -0.17
SNX1-211ENST00000560829 TOM1L1O75674 476 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 TM4SF4P48230 202 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 GPC3P51654 580 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 ARID5AQ03989 594 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 TUBB2AQ13885 445 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 MAPK6Q16659 721 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 C10orf76Q5T2E6 689 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 OLFML2BQ68BL8 750 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 CRELD2Q6UXH1 353 aaPredicted RBP13.99□□□□□ -0.17
SNX1-211ENST00000560829 C15orf39Q6ZRI6 1047 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 ZNF571Q7Z3V5 609 aaPredicted RBP13.99□□□□□ -0.17
SNX1-211ENST00000560829 GPIHBP1Q8IV16 184 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 RNF149Q8NC42 400 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 OR6J1Q8NGC5 347 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 SOCS4Q8WXH5 440 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 TUBB2BQ9BVA1 445 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 FZD8Q9H461 694 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 NENFQ9UMX5 172 aa13.99□□□□□ -0.17
SNX1-211ENST00000560829 GNEQ9Y223 722 aaKnown RBP13.99□□□□□ -0.17
SNX1-211ENST00000560829 A0A087X0T9 212 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms