RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ZGPATQ8N5A5 531 aaKnown RBP5.1□□□□□ -1.59
SPG11-211ENST00000558561 ACER1Q8TDN7 264 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 CHMP4CQ96CF2 233 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 SHISA4Q96DD7 197 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 MCOLN1Q9GZU1 580 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 RNF32Q9H0A6 362 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 KANSL2Q9H9L4 492 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.1□□□□□ -1.59
SPG11-211ENST00000558561 ECHDC1Q9NTX5 307 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 TMOD2Q9NZR1 351 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 GPR160Q9UJ42 338 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 AFG3L2Q9Y4W6 797 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 PPP2R3BQ9Y5P8 575 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 FOCADQ5VW36 1801 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 THSD7BQ9C0I4 1608 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 MAST3O60307 1309 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 A0A1W2PRG0 241 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 BLACEA4D250 179 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 GSG1L2A8MUP6 293 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 BIN1O00499 593 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 PPP1R11O60927 126 aaPredicted RBP5.09□□□□□ -1.59
SPG11-211ENST00000558561 MBD4O95243 580 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 CPP00450 1065 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 MSL3P1P0C860 447 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 FGFR1P11362 822 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 PRKCAP17252 672 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 L1CAMP32004 1257 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 SHMT1P34896 483 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 PDE1AP54750 535 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 GSTO1P78417 241 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 HDAC1Q13547 482 aaPredicted RBP5.09□□□□□ -1.59
SPG11-211ENST00000558561 TNFAIP1Q13829 316 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 INF2Q27J81 1249 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 HSP90AB4PQ58FF6 505 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 TMEM67Q5HYA8 995 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 SLC35F1Q5T1Q4 408 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 TREML2Q5T2D2 321 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 VPS53Q5VIR6 699 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 CYP2R1Q6VVX0 501 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 NLRX1Q86UT6 975 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 ERO1BQ86YB8 467 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 CCDC103Q8IW40 242 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 SMC5Q8IY18 1101 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 CD99L2Q8TCZ2 262 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.09□□□□□ -1.59
SPG11-211ENST00000558561 C1orf159Q96HA4 380 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 STRBPQ96SI9 672 aaKnown RBP5.09□□□□□ -1.59
SPG11-211ENST00000558561 CDC6Q99741 560 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 IL25Q9H293 177 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 DCP1AQ9NPI6 582 aaPredicted RBP5.09□□□□□ -1.59
SPG11-211ENST00000558561 IMPACTQ9P2X3 320 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 CPA4Q9UI42 421 aa5.09□□□□□ -1.59
SPG11-211ENST00000558561 MYH7P12883 1935 aa5.09□□□□□ -1.6
SPG11-211ENST00000558561 RPAP1Q9BWH6 1393 aaPredicted RBP5.08□□□□□ -1.6
SPG11-211ENST00000558561 SMCHD1A6NHR9 2005 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 PTPRFP10586 1907 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 C7orf72A4D263 438 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 MANSC4A6NHS7 340 aaPredicted RBP5.08□□□□□ -1.6
SPG11-211ENST00000558561 TRIM75PA6NK02 468 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 RNF113AO15541 343 aaKnown RBP5.08□□□□□ -1.6
SPG11-211ENST00000558561 CA12O43570 354 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 BAG3O95817 575 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 JUNBP17275 347 aaPredicted RBP5.08□□□□□ -1.6
SPG11-211ENST00000558561 SDHBP21912 280 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 MVKQ03426 396 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 PPATQ06203 517 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 MAP4K2Q12851 820 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 MAP3K12Q12852 859 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 SEPT2Q15019 361 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 KCNMB1Q16558 191 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 GALNT18Q6P9A2 607 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 CTR9Q6PD62 1173 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 GADL1Q6ZQY3 521 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 ZSWIM9Q86XI8 627 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 FOXP4Q8IVH2 680 aaPredicted RBP5.08□□□□□ -1.6
SPG11-211ENST00000558561 PPIL6Q8IXY8 311 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 SCYL3Q8IZE3 742 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 LILRA2Q8N149 483 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 KCTD13Q8WZ19 329 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 FAM168AQ92567 244 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 DPF3Q92784 378 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 ASIC4Q96FT7 647 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 ABHD8Q96I13 439 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 EXOC2Q96KP1 924 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 FAM227BQ96M60 508 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 P2RX7Q99572 595 aaKnown RBP5.08□□□□□ -1.6
SPG11-211ENST00000558561 EPB41L4AQ9HCS5 686 aaPredicted RBP5.08□□□□□ -1.6
SPG11-211ENST00000558561 MCM9Q9NXL9 1143 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 PI4KBQ9UBF8 816 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 STAP2Q9UGK3 403 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 TAF6LQ9Y6J9 622 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 ATAD5Q96QE3 1844 aa5.08□□□□□ -1.6
SPG11-211ENST00000558561 TRBV23-1A0A0A0MS06 115 aa5.07□□□□□ -1.6
SPG11-211ENST00000558561 ZNF503-AS2A6NEH8 195 aa5.07□□□□□ -1.6
SPG11-211ENST00000558561 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.07□□□□□ -1.6
SPG11-211ENST00000558561 PDHXO00330 501 aa5.07□□□□□ -1.6
SPG11-211ENST00000558561 MEFVO15553 781 aaPredicted RBP5.07□□□□□ -1.6
SPG11-211ENST00000558561 CTNND1O60716 968 aaKnown RBP5.07□□□□□ -1.6
SPG11-211ENST00000558561 PRDM1O75626 825 aa5.07□□□□□ -1.6
SPG11-211ENST00000558561 GH2P01242 217 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms