RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 PRKD2Q9BZL6 878 aa7.63□□□□□ -1.19
LRRC28-207ENST00000558500 PLEKHA4Q9H4M7 779 aa7.63□□□□□ -1.19
LRRC28-207ENST00000558500 LTB4R2Q9NPC1 389 aa7.63□□□□□ -1.19
LRRC28-207ENST00000558500 PRMT8Q9NR22 394 aaPredicted RBP7.63□□□□□ -1.19
LRRC28-207ENST00000558500 SH2B1Q9NRF2 756 aaPredicted RBP7.63□□□□□ -1.19
LRRC28-207ENST00000558500 FAM105AQ9NUU6 356 aa7.63□□□□□ -1.19
LRRC28-207ENST00000558500 GABBR1Q9UBS5 961 aa7.63□□□□□ -1.19
LRRC28-207ENST00000558500 ANGPTL2Q9UKU9 493 aa7.63□□□□□ -1.19
LRRC28-207ENST00000558500 SSX2IPQ9Y2D8 614 aa7.63□□□□□ -1.19
LRRC28-207ENST00000558500 FAN1Q9Y2M0 1017 aa7.63□□□□□ -1.19
LRRC28-207ENST00000558500 TAF6LQ9Y6J9 622 aa7.63□□□□□ -1.19
LRRC28-207ENST00000558500 ZFP37Q9Y6Q3 630 aaPredicted RBP7.63□□□□□ -1.19
LRRC28-207ENST00000558500 LAMA4Q16363 1823 aa7.63□□□□□ -1.19
LRRC28-207ENST00000558500 BAZ2BQ9UIF8 2168 aaKnown RBP7.63□□□□□ -1.19
LRRC28-207ENST00000558500 IGLV3-22A0A075B6J6 115 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-207ENST00000558500 FAM86B1E9PN63 330 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 NRP1O14786 923 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 LRP3O75074 770 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 EFEMP2O95967 443 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 C1RP00736 705 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 PSAPP07602 524 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 RETP07949 1114 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 FAM86B2P0C5J1 330 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 SPATA31D3P0C874 917 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 CD72P21854 359 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 SFPQP23246 707 aaKnown RBP eCLIP7.62□□□□□ -1.19
LRRC28-207ENST00000558500 PMLP29590 882 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 ZNF76P36508 570 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 RPS9P46781 194 aaKnown RBP7.62□□□□□ -1.19
LRRC28-207ENST00000558500 GLUD2P49448 558 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 AFF1P51825 1210 aaKnown RBP7.62□□□□□ -1.19
LRRC28-207ENST00000558500 CDC42EP1Q00587 391 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 HDAC1Q13547 482 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-207ENST00000558500 ACAP1Q15027 740 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 ZBTB41Q5SVQ8 909 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 WWC2Q6AWC2 1192 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 TYW1BQ6NUM6 668 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 SPATA31D4Q6ZUB0 917 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 PLEKHM2Q8IWE5 1019 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 MB21D2Q8IYB1 491 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-207ENST00000558500 SMAP1Q8IYB5 467 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-207ENST00000558500 RNF168Q8IYW5 571 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-207ENST00000558500 CCDC82Q8N4S0 544 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 URGCPQ8TCY9 931 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 PGBD4Q96DM1 585 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 NELL2Q99435 816 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 GCOM2Q9BZD3 368 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-207ENST00000558500 RIC8AQ9NPQ8 531 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 NRBP2Q9NSY0 501 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 TBC1D22BQ9NU19 505 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 MARCH5Q9NX47 278 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 ZDHHC7Q9NXF8 308 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 CDH7Q9ULB5 785 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 PIN4Q9Y237 131 aaKnown RBP7.62□□□□□ -1.19
LRRC28-207ENST00000558500 PCDHA10Q9Y5I2 948 aa7.62□□□□□ -1.19
LRRC28-207ENST00000558500 A0A087WZ62 844 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 NCAM2O15394 837 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 TGM5O43548 720 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 GAS2O43903 313 aaKnown RBP7.61□□□□□ -1.19
LRRC28-207ENST00000558500 ZNF862O60290 1169 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 OATP04181 439 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 TDGF1P13385 188 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 RXRAP19793 462 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 FSHRP23945 695 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 TARSP26639 723 aaKnown RBP7.61□□□□□ -1.19
LRRC28-207ENST00000558500 NAPAP54920 295 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 SHC2P98077 582 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 PFKPQ01813 784 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 DSG1Q02413 1049 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 AP3B2Q13367 1082 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 DRP2Q13474 957 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 LPAL2Q16609 132 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 PPP1R18Q6NYC8 613 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 LILRA6Q6PI73 481 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 AGMOQ6ZNB7 445 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 TMTC3Q6ZXV5 915 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 MTSS1LQ765P7 747 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 MRPL10Q7Z7H8 261 aaKnown RBP7.61□□□□□ -1.19
LRRC28-207ENST00000558500 PALB2Q86YC2 1186 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 DDX1Q92499 740 aaKnown RBP7.61□□□□□ -1.19
LRRC28-207ENST00000558500 FAM193BQ96PV7 902 aaPredicted RBP7.61□□□□□ -1.19
LRRC28-207ENST00000558500 FDXACB1Q9BRP7 624 aaPredicted RBP7.61□□□□□ -1.19
LRRC28-207ENST00000558500 ZNF577Q9BSK1 485 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 MTA3Q9BTC8 594 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 INO80BQ9C086 356 aaPredicted RBP7.61□□□□□ -1.19
LRRC28-207ENST00000558500 RSAD1Q9HA92 442 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 CHST7Q9NS84 486 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 SEMA4GQ9NTN9 838 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 KANSL3Q9P2N6 904 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 TCEAL9Q9UHQ7 104 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 RAB23Q9ULC3 237 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 PRG3Q9Y2Y8 225 aaPredicted RBP7.61□□□□□ -1.19
LRRC28-207ENST00000558500 PCDHB2Q9Y5E7 798 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 IGF2RP11717 2491 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 FANCMQ8IYD8 2048 aa7.61□□□□□ -1.19
LRRC28-207ENST00000558500 CNTNAP2Q9UHC6 1331 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 CNOT1A5YKK6 2376 aaKnown RBP7.6□□□□□ -1.19
LRRC28-207ENST00000558500 CCDC69A6NI79 296 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 SH2B2O14492 632 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms