RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 EIF2AQ9BY44 585 aaKnown RBP17.78■□□□□ 0.44
SCFD1-224ENST00000557713 RNF39Q9H2S5 420 aa17.78■□□□□ 0.44
SCFD1-224ENST00000557713 MRPL17Q9NRX2 175 aaKnown RBP17.78■□□□□ 0.44
SCFD1-224ENST00000557713 FAM86C1Q9NVL1 165 aa17.78■□□□□ 0.44
SCFD1-224ENST00000557713 MARCH5Q9NX47 278 aa17.78■□□□□ 0.44
SCFD1-224ENST00000557713 MIOSQ9NXC5 875 aa17.78■□□□□ 0.44
SCFD1-224ENST00000557713 IPPQ9Y573 584 aa17.78■□□□□ 0.44
SCFD1-224ENST00000557713 MYO10Q9HD67 2058 aa17.77■□□□□ 0.44
SCFD1-224ENST00000557713 ARL5CA6NH57 179 aa17.77■□□□□ 0.44
SCFD1-224ENST00000557713 GALR2O43603 387 aaPredicted RBP17.77■□□□□ 0.44
SCFD1-224ENST00000557713 LYPLA2O95372 231 aa17.77■□□□□ 0.44
SCFD1-224ENST00000557713 NR5A1Q13285 461 aa17.77■□□□□ 0.44
SCFD1-224ENST00000557713 RNF168Q8IYW5 571 aaPredicted RBP17.77■□□□□ 0.44
SCFD1-224ENST00000557713 TMEM105Q8N8V8 129 aa17.77■□□□□ 0.44
SCFD1-224ENST00000557713 ATOH1Q92858 354 aaPredicted RBP17.77■□□□□ 0.44
SCFD1-224ENST00000557713 EIF2AK1Q9BQI3 630 aaKnown RBP17.77■□□□□ 0.44
SCFD1-224ENST00000557713 ORC3Q9UBD5 711 aaPredicted RBP17.77■□□□□ 0.44
SCFD1-224ENST00000557713 DENND4AQ7Z401 1863 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 H0Y858 1186 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 ST18O60284 1047 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 ERLIN2O94905 339 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 KRT2P35908 639 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 DSC1Q08554 894 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 AMHR2Q16671 573 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 KIAA0319Q5VV43 1072 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 NOTUMQ6P988 496 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 C15orf39Q6ZRI6 1047 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 WASF1Q92558 559 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 ACSF2Q96CM8 615 aaPredicted RBP17.76■□□□□ 0.43
SCFD1-224ENST00000557713 CCDC51Q96ER9 411 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 CPB2Q96IY4 423 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 RPS6KC1Q96S38 1066 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 GAD1Q99259 594 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 HERC2P3Q9BVR0 1158 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 CSRNP2Q9H175 543 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 ANKEF1Q9NU02 776 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 PCDHA12Q9UN75 941 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 SSX2IPQ9Y2D8 614 aa17.76■□□□□ 0.43
SCFD1-224ENST00000557713 ARL2P36404 184 aa17.75■□□□□ 0.43
SCFD1-224ENST00000557713 OR1G1P47890 313 aa17.75■□□□□ 0.43
SCFD1-224ENST00000557713 AK2P54819 239 aa17.75■□□□□ 0.43
SCFD1-224ENST00000557713 MBTD1Q05BQ5 628 aa17.75■□□□□ 0.43
SCFD1-224ENST00000557713 NCBP1Q09161 790 aaKnown RBP17.75■□□□□ 0.43
SCFD1-224ENST00000557713 CAPSQ13938 189 aa17.75■□□□□ 0.43
SCFD1-224ENST00000557713 TFDP1Q14186 410 aa17.75■□□□□ 0.43
SCFD1-224ENST00000557713 ASTLQ6HA08 431 aaPredicted RBP17.75■□□□□ 0.43
SCFD1-224ENST00000557713 CCDC149Q6ZUS6 474 aa17.75■□□□□ 0.43
SCFD1-224ENST00000557713 OTOP3Q7RTS5 596 aa17.75■□□□□ 0.43
SCFD1-224ENST00000557713 CMASQ8NFW8 434 aaPredicted RBP17.75■□□□□ 0.43
SCFD1-224ENST00000557713 ASAP3Q8TDY4 903 aa17.75■□□□□ 0.43
SCFD1-224ENST00000557713 RXFP1Q9HBX9 757 aa17.75■□□□□ 0.43
SCFD1-224ENST00000557713 PRG3Q9Y2Y8 225 aaPredicted RBP17.75■□□□□ 0.43
SCFD1-224ENST00000557713 HES2Q9Y543 173 aa17.75■□□□□ 0.43
SCFD1-224ENST00000557713 ARID2Q68CP9 1835 aa17.75■□□□□ 0.43
SCFD1-224ENST00000557713 INO80B-WBP1J3KQ70 363 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 C2CD2LO14523 706 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 TEX28O15482 410 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 DGAT1O75907 488 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 URODP06132 367 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 MLH1P40692 756 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 CLCN5P51795 746 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 ANAPC15P60006 121 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 ANKRD1Q15327 319 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 ZFP42Q96MM3 310 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 NFKBIZQ9BYH8 718 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 MAN1C1Q9NR34 630 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 CHST7Q9NS84 486 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 GIT1Q9Y2X7 761 aa17.74■□□□□ 0.43
SCFD1-224ENST00000557713 SPDYE4A6NLX3 237 aa17.73■□□□□ 0.43
SCFD1-224ENST00000557713 PROB1E7EW31 1015 aa17.73■□□□□ 0.43
SCFD1-224ENST00000557713 F8W810 466 aa17.73■□□□□ 0.43
SCFD1-224ENST00000557713 GFRA3O60609 400 aa17.73■□□□□ 0.43
SCFD1-224ENST00000557713 ARF4P18085 180 aaPredicted RBP17.73■□□□□ 0.43
SCFD1-224ENST00000557713 GLRA2P23416 452 aa17.73■□□□□ 0.43
SCFD1-224ENST00000557713 SCNN1GP51170 649 aa17.73■□□□□ 0.43
SCFD1-224ENST00000557713 TDGQ13569 410 aa17.73■□□□□ 0.43
SCFD1-224ENST00000557713 CALCRLQ16602 461 aa17.73■□□□□ 0.43
SCFD1-224ENST00000557713 NECAB1Q8N987 351 aa17.73■□□□□ 0.43
SCFD1-224ENST00000557713 GSTCDQ8NEC7 633 aa17.73■□□□□ 0.43
SCFD1-224ENST00000557713 RHOBTB2Q9BYZ6 727 aa17.73■□□□□ 0.43
SCFD1-224ENST00000557713 TTC12Q9H892 705 aaPredicted RBP17.73■□□□□ 0.43
SCFD1-224ENST00000557713 KCNK12Q9HB15 430 aa17.73■□□□□ 0.43
SCFD1-224ENST00000557713 BRMS1Q9HCU9 246 aa17.73■□□□□ 0.43
SCFD1-224ENST00000557713 CCDC195A0A1B0GUA6 201 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 A0A1B0GUA9 196 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 BTBD18B2RXH4 712 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 WNT7AO00755 349 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 N4BP1O75113 896 aaKnown RBP17.72■□□□□ 0.43
SCFD1-224ENST00000557713 PAPLNO95428 1278 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 C1RP00736 705 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 ADH1AP07327 375 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 XRCC6P12956 609 aaKnown RBP eCLIP17.72■□□□□ 0.43
SCFD1-224ENST00000557713 GLUD2P49448 558 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 RARRES1P49788 294 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 DSG1Q02413 1049 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 ME3Q16798 604 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 CYP26C1Q6V0L0 522 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 MTMR9Q96QG7 549 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 COLEC11Q9BWP8 271 aa17.72■□□□□ 0.43
SCFD1-224ENST00000557713 MFSD1Q9H3U5 465 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms