RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 SLC9A2Q9UBY0 812 aa10.73□□□□□ -0.69
NEDD1-211ENST00000557454 SSX2IPQ9Y2D8 614 aa10.73□□□□□ -0.69
NEDD1-211ENST00000557454 DOCK6Q96HP0 2047 aa10.73□□□□□ -0.69
NEDD1-211ENST00000557454 KLRF2D3W0D1 207 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 HBP1O60381 514 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 ECI2O75521 394 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 RPP40O75818 363 aaKnown RBP10.72□□□□□ -0.69
NEDD1-211ENST00000557454 DDHD2O94830 711 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 EIF4BP23588 611 aaKnown RBP10.72□□□□□ -0.69
NEDD1-211ENST00000557454 PHKA2P46019 1235 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 NLRP11P59045 1033 aaKnown RBP10.72□□□□□ -0.69
NEDD1-211ENST00000557454 FGD1P98174 961 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 SCAPQ12770 1279 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 USP17L6PQ6QN14 398 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 Q6ZS52 159 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 GAB3Q8WWW8 586 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 ESR2Q92731 530 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 GPATCH3Q96I76 525 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 RBM12Q9NTZ6 932 aaKnown RBP10.72□□□□□ -0.69
NEDD1-211ENST00000557454 MARCH5Q9NX47 278 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 DACT1Q9NYF0 836 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 PRG3Q9Y2Y8 225 aaPredicted RBP10.72□□□□□ -0.69
NEDD1-211ENST00000557454 COL1A2P08123 1366 aa10.72□□□□□ -0.69
NEDD1-211ENST00000557454 LNP1A1A4G5 178 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 NRP1O14786 923 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 CCL16O15467 120 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 OFD1O75665 1012 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 PTGDRQ13258 359 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 GRM2Q14416 872 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 LILRA6Q6PI73 481 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 ENAHQ8N8S7 591 aaPredicted RBP10.71□□□□□ -0.69
NEDD1-211ENST00000557454 SMARCC2Q8TAQ2 1214 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 B3GALT6Q96L58 329 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 BRD9Q9H8M2 597 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 POLIQ9UNA4 740 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 AKT3Q9Y243 479 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 FAN1Q9Y2M0 1017 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 RAI2Q9Y5P3 530 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 UBIAD1Q9Y5Z9 338 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 PIAS3Q9Y6X2 628 aa10.71□□□□□ -0.69
NEDD1-211ENST00000557454 SPAG17Q6Q759 2223 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 SPAARA0A1B0GVQ0 90 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 CSDE1O75534 798 aaKnown RBP10.7□□□□□ -0.7
NEDD1-211ENST00000557454 CCDC192P0DO97 292 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 PCP11498 1178 aaKnown RBP10.7□□□□□ -0.7
NEDD1-211ENST00000557454 RPL17P18621 184 aaKnown RBP10.7□□□□□ -0.7
NEDD1-211ENST00000557454 PXNP49023 591 aaPredicted RBP10.7□□□□□ -0.7
NEDD1-211ENST00000557454 SLC26A2P50443 739 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 AFF1P51825 1210 aaKnown RBP10.7□□□□□ -0.7
NEDD1-211ENST00000557454 DSG1Q02413 1049 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 TRAF1Q13077 416 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 ZNF484Q5JVG2 852 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 TANGO2Q6ICL3 276 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 IQCA1Q86XH1 822 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 RNF168Q8IYW5 571 aaPredicted RBP10.7□□□□□ -0.7
NEDD1-211ENST00000557454 PANK1Q8TE04 598 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 SCLT1Q96NL6 688 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 ZSCAN10Q96SZ4 725 aaPredicted RBP10.7□□□□□ -0.7
NEDD1-211ENST00000557454 TMEM9BQ9NQ34 198 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 MAD2L2Q9UI95 211 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 RAXQ9Y2V3 346 aa10.7□□□□□ -0.7
NEDD1-211ENST00000557454 F8W810 466 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 BACH1O14867 736 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 ARHGAP6O43182 974 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 ALDH2P05091 517 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 DARSP14868 501 aaKnown RBP10.69□□□□□ -0.7
NEDD1-211ENST00000557454 HOXA6P31267 233 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 UAP1L1Q3KQV9 507 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 CCDC178Q5BJE1 867 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 TWF2Q6IBS0 349 aaKnown RBP10.69□□□□□ -0.7
NEDD1-211ENST00000557454 ZNF605Q86T29 641 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 CHCHD4Q8N4Q1 142 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 URGCPQ8TCY9 931 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 PIK3R5Q8WYR1 880 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 SLC39A7Q92504 469 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 CUL5Q93034 780 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 MCRS1Q96EZ8 462 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 CRELD1Q96HD1 420 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 FAM193BQ96PV7 902 aaPredicted RBP10.69□□□□□ -0.7
NEDD1-211ENST00000557454 MAP7D2Q96T17 732 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 TMEM175Q9BSA9 504 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 RNF41Q9H4P4 317 aaPredicted RBP10.69□□□□□ -0.7
NEDD1-211ENST00000557454 JADE2Q9NQC1 790 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 HCFC1R1Q9NWW0 138 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 FBXW11Q9UKB1 542 aa10.69□□□□□ -0.7
NEDD1-211ENST00000557454 PNMA6FA0A0J9YX94 578 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 FAM221BA6H8Z2 402 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 HAX1O00165 279 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 CDX4O14627 284 aaPredicted RBP10.68□□□□□ -0.7
NEDD1-211ENST00000557454 MEIS2O14770 477 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 CAVIN2O95810 425 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 EFEMP2O95967 443 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 C1RP00736 705 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 HNRNPA1P09651 372 aaKnown RBP eCLIP10.68□□□□□ -0.7
NEDD1-211ENST00000557454 CCNE1P24864 410 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 SIM1P81133 766 aaPredicted RBP10.68□□□□□ -0.7
NEDD1-211ENST00000557454 CREB5Q02930 508 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 LRRC32Q14392 662 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 PLK5Q496M5 336 aa10.68□□□□□ -0.7
NEDD1-211ENST00000557454 WDR44Q5JSH3 913 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms