RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 ATP6V0A4Q9HBG4 840 aa9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 JPH1Q9HDC5 661 aaPredicted RBP9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 UBE2TQ9NPD8 197 aaPredicted RBP9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 KMT5AQ9NQR1 393 aa9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 CYP39A1Q9NYL5 469 aa9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 CALCOCO1Q9P1Z2 691 aa9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 GABBR1Q9UBS5 961 aa9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 SLC9A2Q9UBY0 812 aa9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 FBXO40Q9UH90 709 aa9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 FAN1Q9Y2M0 1017 aa9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 AFG3L2Q9Y4W6 797 aa9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 RIPK3Q9Y572 518 aa9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 GJA3Q9Y6H8 435 aa9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 A0A0G2JMZ2 1700 aa9.67□□□□□ -0.86
PPP4R3A-212ENST00000557382 POLR2AP24928 1970 aaKnown RBP9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 DOCK5Q9H7D0 1870 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 DENND3A2RUS2 1198 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 CCDC169A6NNP5 214 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 TMCO5BA8MYB1 307 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 CEP104O60308 925 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 HSF2BPO75031 334 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 RNF40O75150 1001 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 ZMYND10O75800 440 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 RGS20O76081 388 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 ZBTB7AO95365 584 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 PIGRP01833 764 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 SUPT20HL2P0C7V6 817 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 HMGCS2P54868 508 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 GPC5P78333 572 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 DLG4P78352 724 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 PPFIA1Q13136 1202 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 TMEM132BQ14DG7 1078 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 STXBP2Q15833 593 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 ARHGAP44Q17R89 818 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 ANGEL2Q5VTE6 544 aaKnown RBP9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 PLA2G4FQ68DD2 849 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 MAATS1Q7Z4T9 603 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 GPD1LQ8N335 351 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 RDH13Q8NBN7 331 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 CCDC26Q8TAB7 109 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 AFAP1L1Q8TED9 768 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 SHC3Q92529 594 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 ZKSCAN4Q969J2 545 aaPredicted RBP9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 NT5C1BQ96P26 610 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 RPS6KC1Q96S38 1066 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 KRT12Q99456 494 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 SGIP1Q9BQI5 828 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 EPB41L5Q9HCM4 733 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 A1CFQ9NQ94 594 aaKnown RBP9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 CYP26B1Q9NR63 512 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 GPRC5DQ9NZD1 345 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 EHD2Q9NZN4 543 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 BCS1LQ9Y276 419 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 STYXL1Q9Y6J8 313 aa9.66□□□□□ -0.86
PPP4R3A-212ENST00000557382 SPDYE16A6NNV3 312 aaPredicted RBP9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 ANKRD63C9JTQ0 380 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 AGPSO00116 658 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 DDX3YO15523 660 aaKnown RBP9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 ZNF862O60290 1169 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 BUB1BO60566 1050 aaPredicted RBP9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 GGPS1O95749 300 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 ADRB2P07550 413 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 GLI1P08151 1106 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 ADSSP30520 456 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 GGCXP38435 758 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 GCLMP48507 274 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 ACTR2P61160 394 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 CLDN10P78369 228 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 SLC7A5Q01650 507 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 CYP24A1Q07973 514 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 DGKZQ13574 1117 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 SLFN12LQ6IEE8 588 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 ARHGEF19Q8IW93 802 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 EFCAB13Q8IY85 973 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 RPUSD2Q8IZ73 545 aaKnown RBP9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 GPC2Q8N158 579 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 FBXL13Q8NEE6 735 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 PLEKHO2Q8TD55 490 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 SEC14L1Q92503 715 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 WNK4Q96J92 1243 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 RUFY1Q96T51 708 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 NIFKQ9BYG3 293 aaKnown RBP9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 TAF1DQ9H5J8 278 aaPredicted RBP9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 GPRC5CQ9NQ84 441 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 SMARCAL1Q9NZC9 954 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 ARHGAP28Q9P2N2 729 aa9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 NOCTQ9UK39 431 aaKnown RBP9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 PACSIN2Q9UNF0 486 aaPredicted RBP9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 NOC2LQ9Y3T9 749 aaKnown RBP9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 MAFBQ9Y5Q3 323 aaPredicted RBP9.65□□□□□ -0.86
PPP4R3A-212ENST00000557382 PAPPA2Q9BXP8 1791 aa9.65□□□□□ -0.87
PPP4R3A-212ENST00000557382 ZNF541Q9H0D2 1346 aa9.64□□□□□ -0.87
PPP4R3A-212ENST00000557382 SSC5DA1L4H1 1573 aa9.64□□□□□ -0.87
PPP4R3A-212ENST00000557382 IGKV6D-21A0A0A0MT36 114 aa9.64□□□□□ -0.87
PPP4R3A-212ENST00000557382 GOLGA6L10A0A0M3HER8 536 aa9.64□□□□□ -0.87
PPP4R3A-212ENST00000557382 FAM187AA6NFU0 413 aa9.64□□□□□ -0.87
PPP4R3A-212ENST00000557382 ZNF233A6NK53 670 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms