RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 CSADQ9Y600 493 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 ZC3H4Q9UPT8 1303 aaKnown RBP10.96□□□□□ -0.65
TMEM260-211ENST00000556648 ZNFX1Q9P2E3 1918 aaKnown RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 A0A0A6YYK5 440 aaPredicted RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 P4HA2O15460 535 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 BUB1BO60566 1050 aaPredicted RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 EIF3JO75822 258 aaKnown RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 STAM2O75886 525 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 OATP04181 439 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 EDN1P05305 212 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 TMEM253P0C7T8 217 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 CHRNB2P17787 502 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 SNRPFP62306 86 aaKnown RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 XKR3Q5GH77 459 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 LMBRD2Q68DH5 695 aaPredicted RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 C8orf74Q6P047 294 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 NOP9Q86U38 636 aaKnown RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 NT5DC3Q86UY8 548 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 SULF1Q8IWU6 871 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 RPUSD2Q8IZ73 545 aaKnown RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 METTL13Q8N6R0 699 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 PROCA1Q8NCQ7 364 aaPredicted RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 SLC17A8Q8NDX2 589 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 MCPH1Q8NEM0 835 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 SLC35G2Q8TBE7 412 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 AENQ8WTP8 325 aaKnown RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 DHX38Q92620 1227 aaKnown RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 TAF4BQ92750 862 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 DCPSQ96C86 337 aaKnown RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 BICD1Q96G01 975 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 MFSD14AQ96MC6 490 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 CEP89Q96ST8 783 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 NTPCRQ9BSD7 190 aaKnown RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 PI4K2AQ9BTU6 479 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 HAPLN2Q9GZV7 340 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 SPATC1LQ9H0A9 340 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 TXNRD2Q9NNW7 524 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 CHORDC1Q9UHD1 332 aaPredicted RBP10.96□□□□□ -0.66
TMEM260-211ENST00000556648 INTUQ9ULD6 942 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 COG5Q9UP83 839 aa10.96□□□□□ -0.66
TMEM260-211ENST00000556648 A0A0G2JLL6 359 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-211ENST00000556648 GSTTP1A0A1W2PQM5 241 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 ESYT3A0FGR9 886 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 HNRNPDLO14979 420 aaKnown RBP10.95□□□□□ -0.66
TMEM260-211ENST00000556648 ATG7O95352 703 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 PGK2P07205 417 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 GLI1P08151 1106 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 DLATP10515 647 aaKnown RBP10.95□□□□□ -0.66
TMEM260-211ENST00000556648 YBX3P16989 372 aaKnown RBP eCLIP10.95□□□□□ -0.66
TMEM260-211ENST00000556648 RFX1P22670 979 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 GLRA2P23416 452 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 POLGP54098 1239 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-211ENST00000556648 PEX26Q7Z412 305 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 PRRT2Q7Z6L0 340 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-211ENST00000556648 DAAM2Q86T65 1068 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 PPM1KQ8N3J5 372 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 DNERQ8NFT8 737 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 HELQQ8TDG4 1101 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 UPF1Q92900 1129 aaKnown RBP eCLIP10.95□□□□□ -0.66
TMEM260-211ENST00000556648 FGD4Q96M96 766 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 FBXL18Q96ME1 805 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 KRT12Q99456 494 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 TMEM8AQ9HCN3 771 aa10.95□□□□□ -0.66
TMEM260-211ENST00000556648 NOCTQ9UK39 431 aaKnown RBP10.95□□□□□ -0.66
TMEM260-211ENST00000556648 MAFBQ9Y5Q3 323 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-211ENST00000556648 CYP26A1O43174 497 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 ATMINO43313 823 aaPredicted RBP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 CEP104O60308 925 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 DKC1O60832 514 aaKnown RBP eCLIP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 FARP2O94887 1054 aaPredicted RBP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 ARIH2O95376 493 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 EDNRBP24530 442 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 MCM3P25205 808 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 MCCD1P59942 119 aaPredicted RBP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 CETN1Q12798 172 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 ZBTB41Q5SVQ8 909 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 SLC47A2Q86VL8 602 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 KLHL7Q8IXQ5 586 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 FAM71AQ8IYT1 594 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 USP38Q8NB14 1042 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 EPS8L1Q8TE68 723 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 RFFLQ8WZ73 363 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 ZNF516Q92618 1163 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 TATDN2Q93075 761 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 CDCA5Q96FF9 252 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 ZBTB45Q96K62 511 aaPredicted RBP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 IFT74Q96LB3 600 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 ASCC2Q9H1I8 757 aaPredicted RBP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 STIM2Q9P246 746 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 PTPRJQ12913 1337 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 SOCS7O14512 581 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 PMM2O15305 246 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 MMEP08473 750 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 ITGA4P13612 1032 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 RTP1P59025 263 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 NLRP11P59045 1033 aaKnown RBP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 IRX3P78415 501 aaPredicted RBP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 PPATQ06203 517 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 DRP2Q13474 957 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 TRADDQ15628 312 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms