RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 ZNF697Q5TEC3 545 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 AFTPHQ6ULP2 937 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 NXPE4Q6UWF7 544 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 CRELD2Q6UXH1 353 aaPredicted RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 JAMLQ86YT9 394 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 TPH2Q8IWU9 490 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 TNS4Q8IZW8 715 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 TRAPPC12Q8WVT3 735 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 DTNBP1Q96EV8 351 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 PRAM1Q96QH2 718 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 SH3GL3Q99963 347 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 KCNS3Q9BQ31 491 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 TINF2Q9BSI4 451 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 MLPHQ9BV36 600 aaPredicted RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 CCDC90BQ9GZT6 254 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 SAV1Q9H4B6 383 aaPredicted RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 XKR8Q9H6D3 395 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 CDHR5Q9HBB8 845 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 SAYSD1Q9NPB0 183 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 TOPORSQ9NS56 1045 aaPredicted RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 DDX43Q9NXZ2 648 aaKnown RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 CACNA2D2Q9NY47 1150 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 DACT1Q9NYF0 836 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 ADAMTS1Q9UHI8 967 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 CYTH4Q9UIA0 394 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.97□□□□□ -2.09
KTN1-224ENST00000556631 ZNF148Q9UQR1 794 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 HIF3AQ9Y2N7 669 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 LEMD3Q9Y2U8 911 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 WASF2Q9Y6W5 498 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 V9GYY5 206 aaPredicted RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 TOP2BQ02880 1626 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 LINC00854A0A1B0GVQ3 168 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 LRRIQ3A6PVS8 624 aaPredicted RBP1.96□□□□□ -2.1
KTN1-224ENST00000556631 H0Y8G0 127 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 HIP1O00291 1037 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 PEX12O00623 359 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 E2F3O00716 465 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 ENPP3O14638 875 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 SLC16A5O15375 505 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 CFLARO15519 480 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 PPIP5K2O43314 1243 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 CCNT1O60563 726 aaKnown RBP1.96□□□□□ -2.1
KTN1-224ENST00000556631 OPHN1O60890 802 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 FBXO21O94952 628 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 RAPGEF3O95398 923 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 LCA5LO95447 670 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 KRT14P02533 472 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 APOA1P02647 267 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 RB1P06400 928 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 FGFR2P21802 821 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 ADSLP30566 484 aaPredicted RBP1.96□□□□□ -2.1
KTN1-224ENST00000556631 EIF2DP41214 584 aaKnown RBP1.96□□□□□ -2.1
KTN1-224ENST00000556631 AFF3P51826 1226 aaKnown RBP1.96□□□□□ -2.1
KTN1-224ENST00000556631 NAPAP54920 295 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 CSE1LP55060 971 aaKnown RBP1.96□□□□□ -2.1
KTN1-224ENST00000556631 CSNK2BP67870 215 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 RUNX1T1Q06455 604 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 NCBP1Q09161 790 aaKnown RBP1.96□□□□□ -2.1
KTN1-224ENST00000556631 ORC1Q13415 861 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 RIPK1Q13546 671 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 TRADDQ15628 312 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 CRY1Q16526 586 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 ATXN7L2Q5T6C5 722 aaPredicted RBP1.96□□□□□ -2.1
KTN1-224ENST00000556631 FAM69AQ5T7M9 428 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 SH3PXD2AQ5TCZ1 1133 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 CCDC62Q6P9F0 684 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 CAPN12Q6ZSI9 719 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 SRGAP1Q7Z6B7 1085 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 LRRTM3Q86VH5 581 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 SCUBE1Q8IWY4 988 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 TUSC5Q8IXB3 177 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 CACNA2D3Q8IZS8 1091 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 FAM43AQ8N2R8 423 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 OXR1Q8N573 874 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 ANKRD13CQ8N6S4 541 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 BEST2Q8NFU1 509 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 TDRD7Q8NHU6 1098 aaKnown RBP1.96□□□□□ -2.1
KTN1-224ENST00000556631 MDM1Q8TC05 714 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 BRIX1Q8TDN6 353 aaKnown RBP1.96□□□□□ -2.1
KTN1-224ENST00000556631 PXYLP1Q8TE99 480 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 COG1Q8WTW3 980 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 HPS1Q92902 700 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 NINJ1Q92982 152 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 PTERQ96BW5 349 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 HDAC11Q96DB2 347 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 RRP36Q96EU6 259 aaKnown RBP1.96□□□□□ -2.1
KTN1-224ENST00000556631 EXOC2Q96KP1 924 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 PPM1MQ96MI6 270 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 TMEM74Q96NL1 305 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 USP28Q96RU2 1077 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 SETDB2Q96T68 719 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 ZBED2Q9BTP6 218 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 TEX12Q9BXU0 123 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 PACSIN1Q9BY11 444 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 CCSER1Q9C0I3 900 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 TRIT1Q9H3H1 467 aaKnown RBP1.96□□□□□ -2.1
KTN1-224ENST00000556631 RPRD1BQ9NQG5 326 aaKnown RBP1.96□□□□□ -2.1
KTN1-224ENST00000556631 VPS45Q9NRW7 570 aa1.96□□□□□ -2.1
KTN1-224ENST00000556631 TXLNGQ9NUQ3 528 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms