RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 SLC23A3Q6PIS1 610 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 ERC1Q8IUD2 1116 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 RPAP2Q8IXW5 612 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-239ENST00000556315 TOP6BLQ8N6T0 577 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 GOLM1Q8NBJ4 401 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 NEK9Q8TD19 979 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 GATAD2BQ8WXI9 593 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 GAL3ST3Q96A11 431 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 PRRX2Q99811 253 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 VTA1Q9NP79 307 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 A1CFQ9NQ94 594 aaKnown RBP5.73□□□□□ -1.49
ATXN3-239ENST00000556315 CLIP2Q9UDT6 1046 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 SYNPO2Q9UMS6 1093 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 PCDHA4Q9UN74 947 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 ATAD5Q96QE3 1844 aa5.73□□□□□ -1.49
ATXN3-239ENST00000556315 SMCHD1A6NHR9 2005 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 FRMPD3Q5JV73 1810 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 MUC6Q6W4X9 2439 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 LOC102724159A0A0B4J2E5 919 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 ABHD14A-ACY1A0A1B0GW23 586 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 LCHNA4D1U4 455 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 LINC01553A4QN01 128 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 DBX1A6NMT0 343 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 EFCAB14O75071 495 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 GJB5O95377 273 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 BPNT1O95861 308 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 GARTP22102 1010 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 PTGS1P23219 599 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 ADD2P35612 726 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 WDR5P61964 334 aaKnown RBP5.72□□□□□ -1.49
ATXN3-239ENST00000556315 RING1Q06587 406 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 PWP2Q15269 919 aaKnown RBP5.72□□□□□ -1.49
ATXN3-239ENST00000556315 UBE3CQ15386 1083 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 PTPROQ16827 1216 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 HSP90AB4PQ58FF6 505 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 TMEM63BQ5T3F8 832 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 SLFN13Q68D06 897 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 EEPD1Q7L9B9 569 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 ZNF444Q8N0Y2 327 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-239ENST00000556315 TMEM57Q8N5G2 664 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 CAGE1Q8TC20 777 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 MORC4Q8TE76 937 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 AFAP1L1Q8TED9 768 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 GDPD5Q8WTR4 605 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 CHURC1Q8WUH1 139 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 STAG1Q8WVM7 1258 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 FRAT1Q92837 279 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-239ENST00000556315 ELMO3Q96BJ8 720 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 CRBNQ96SW2 442 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 DNAJC2Q99543 621 aaKnown RBP5.72□□□□□ -1.49
ATXN3-239ENST00000556315 WDR11Q9BZH6 1224 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.72□□□□□ -1.49
ATXN3-239ENST00000556315 ZNF287Q9HBT7 754 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 HOMER2Q9NSB8 354 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 RNF146Q9NTX7 359 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 ADD3Q9UEY8 706 aaKnown RBP5.72□□□□□ -1.49
ATXN3-239ENST00000556315 ADAMTS1Q9UHI8 967 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 MTUS1Q9ULD2 1270 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 SLC4A4Q9Y6R1 1079 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 TCF20Q9UGU0 1960 aaKnown RBP5.72□□□□□ -1.49
ATXN3-239ENST00000556315 MYO9BQ13459 2157 aa5.72□□□□□ -1.49
ATXN3-239ENST00000556315 PRRC2BQ5JSZ5 2229 aaKnown RBP5.71□□□□□ -1.49
ATXN3-239ENST00000556315 PLXNA1Q9UIW2 1896 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 IGKV6D-41A0A0C4DH26 115 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 TMEM232C9JQI7 657 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 H3BQ06 376 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-239ENST00000556315 NKRFO15226 690 aaKnown RBP eCLIP5.71□□□□□ -1.5
ATXN3-239ENST00000556315 NCK2O43639 380 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 GREM1O60565 184 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 PLA2G6O60733 806 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 TTLL1O95922 423 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 ALAS1P13196 640 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 RPL6Q02878 288 aaKnown RBP5.71□□□□□ -1.5
ATXN3-239ENST00000556315 ZP2Q05996 745 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 GNL2Q13823 731 aaKnown RBP5.71□□□□□ -1.5
ATXN3-239ENST00000556315 MPP2Q14168 576 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 GPNMBQ14956 572 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 ZNF124Q15973 351 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 PTGISQ16647 500 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 SBK1Q52WX2 424 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 CNKSR3Q6P9H4 555 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 GIMAP6Q6P9H5 292 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 FBXL19Q6PCT2 694 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 HDXQ7Z353 690 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 BMP8AQ7Z5Y6 402 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 FAM160B2Q86V87 743 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 ADHFE1Q8IWW8 467 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 FBXO16Q8IX29 292 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-239ENST00000556315 LRRC47Q8N1G4 583 aaKnown RBP5.71□□□□□ -1.5
ATXN3-239ENST00000556315 CLASRPQ8N2M8 674 aaKnown RBP5.71□□□□□ -1.5
ATXN3-239ENST00000556315 GMCL1P1Q8NEA9 526 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 PABPC5Q96DU9 382 aaKnown RBP5.71□□□□□ -1.5
ATXN3-239ENST00000556315 MRPL38Q96DV4 380 aaKnown RBP5.71□□□□□ -1.5
ATXN3-239ENST00000556315 SPATA32Q96LK8 384 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 NT5C1AQ9BXI3 368 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 SSU72Q9NP77 194 aaKnown RBP5.71□□□□□ -1.5
ATXN3-239ENST00000556315 PAG1Q9NWQ8 432 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 MTMR4Q9NYA4 1195 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 CYP39A1Q9NYL5 469 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 ARPP21Q9UBL0 812 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms