RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PHYKPLQ8IUZ5 450 aa5.2□□□□□ -1.58
SCFD1-218ENST00000556256 HIST1H2AHQ96KK5 128 aa5.2□□□□□ -1.58
SCFD1-218ENST00000556256 ELF4Q99607 663 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-218ENST00000556256 HIST1H2AJQ99878 128 aa5.2□□□□□ -1.58
SCFD1-218ENST00000556256 POFUT1Q9H488 388 aa5.2□□□□□ -1.58
SCFD1-218ENST00000556256 SPON1Q9HCB6 807 aa5.2□□□□□ -1.58
SCFD1-218ENST00000556256 INTS7Q9NVH2 962 aaKnown RBP5.2□□□□□ -1.58
SCFD1-218ENST00000556256 PODXL2Q9NZ53 605 aa5.2□□□□□ -1.58
SCFD1-218ENST00000556256 SIRPGQ9P1W8 387 aa5.2□□□□□ -1.58
SCFD1-218ENST00000556256 TLK1Q9UKI8 766 aa5.2□□□□□ -1.58
SCFD1-218ENST00000556256 SALL3Q9BXA9 1300 aa5.2□□□□□ -1.58
SCFD1-218ENST00000556256 FAM221BA6H8Z2 402 aa5.19□□□□□ -1.58
SCFD1-218ENST00000556256 PRR5-ARHGAP8B1AHC4 643 aa5.19□□□□□ -1.58
SCFD1-218ENST00000556256 DIRC3C9JPN6 131 aa5.19□□□□□ -1.58
SCFD1-218ENST00000556256 IGLV2-14P01704 120 aa5.19□□□□□ -1.58
SCFD1-218ENST00000556256 EGR2P11161 476 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-218ENST00000556256 BLOC1S1P78537 153 aa5.19□□□□□ -1.58
SCFD1-218ENST00000556256 PDCD4Q53EL6 469 aaKnown RBP5.19□□□□□ -1.58
SCFD1-218ENST00000556256 C7orf31Q8N865 590 aa5.19□□□□□ -1.58
SCFD1-218ENST00000556256 ASB10Q8WXI3 467 aa5.19□□□□□ -1.58
SCFD1-218ENST00000556256 PPP1R1BQ9UD71 204 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-218ENST00000556256 CLCA2Q9UQC9 943 aa5.19□□□□□ -1.58
SCFD1-218ENST00000556256 CCDC163A0A0D9SF12 145 aa5.18□□□□□ -1.58
SCFD1-218ENST00000556256 SPDEFO95238 335 aa5.18□□□□□ -1.58
SCFD1-218ENST00000556256 MATN4O95460 622 aa5.18□□□□□ -1.58
SCFD1-218ENST00000556256 LY86O95711 162 aa5.18□□□□□ -1.58
SCFD1-218ENST00000556256 HLA-DOAP06340 250 aa5.18□□□□□ -1.58
SCFD1-218ENST00000556256 HSP90B1P14625 803 aaKnown RBP5.18□□□□□ -1.58
SCFD1-218ENST00000556256 DRICH1Q6PGQ1 229 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-218ENST00000556256 SRRM1Q8IYB3 904 aaKnown RBP5.18□□□□□ -1.58
SCFD1-218ENST00000556256 CAGE1Q8TC20 777 aa5.18□□□□□ -1.58
SCFD1-218ENST00000556256 SCARB1Q8WTV0 552 aa5.18□□□□□ -1.58
SCFD1-218ENST00000556256 RTF1Q92541 710 aaKnown RBP5.18□□□□□ -1.58
SCFD1-218ENST00000556256 ANKS1AQ92625 1134 aa5.18□□□□□ -1.58
SCFD1-218ENST00000556256 USP36Q9P275 1121 aaKnown RBP5.18□□□□□ -1.58
SCFD1-218ENST00000556256 RNF7Q9UBF6 113 aa5.18□□□□□ -1.58
SCFD1-218ENST00000556256 MAP3K2Q9Y2U5 619 aa5.18□□□□□ -1.58
SCFD1-218ENST00000556256 B4E1Z4 1266 aa5.17□□□□□ -1.58
SCFD1-218ENST00000556256 PCDH8O95206 1070 aa5.17□□□□□ -1.58
SCFD1-218ENST00000556256 NHLH1Q02575 133 aa5.17□□□□□ -1.58
SCFD1-218ENST00000556256 DUSP2Q05923 314 aa5.17□□□□□ -1.58
SCFD1-218ENST00000556256 RESTQ13127 1097 aa5.17□□□□□ -1.58
SCFD1-218ENST00000556256 MPP3Q13368 585 aa5.17□□□□□ -1.58
SCFD1-218ENST00000556256 TAS1R1Q7RTX1 841 aa5.17□□□□□ -1.58
SCFD1-218ENST00000556256 MSL3Q8N5Y2 521 aaKnown RBP5.17□□□□□ -1.58
SCFD1-218ENST00000556256 OR10H5Q8NGA6 315 aa5.17□□□□□ -1.58
SCFD1-218ENST00000556256 SLC9A6Q92581 669 aa5.17□□□□□ -1.58
SCFD1-218ENST00000556256 CABP5Q9NP86 173 aa5.17□□□□□ -1.58
SCFD1-218ENST00000556256 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCFD1-218ENST00000556256 MAST3O60307 1309 aa5.17□□□□□ -1.58
SCFD1-218ENST00000556256 MYPNQ86TC9 1320 aa5.17□□□□□ -1.58
SCFD1-218ENST00000556256 DNAJC9-AS1A6NH13 148 aa5.16□□□□□ -1.58
SCFD1-218ENST00000556256 RBMXL2O75526 392 aaKnown RBP5.16□□□□□ -1.58
SCFD1-218ENST00000556256 RASA3Q14644 834 aa5.16□□□□□ -1.58
SCFD1-218ENST00000556256 ANKS6Q68DC2 871 aa5.16□□□□□ -1.58
SCFD1-218ENST00000556256 SLC44A3Q8N4M1 653 aa5.16□□□□□ -1.58
SCFD1-218ENST00000556256 JMYQ8N9B5 988 aa5.16□□□□□ -1.58
SCFD1-218ENST00000556256 ZSWIM2Q8NEG5 633 aa5.16□□□□□ -1.58
SCFD1-218ENST00000556256 DNAJC7Q99615 494 aa5.16□□□□□ -1.58
SCFD1-218ENST00000556256 FDXACB1Q9BRP7 624 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-218ENST00000556256 DUSP26Q9BV47 211 aa5.16□□□□□ -1.58
SCFD1-218ENST00000556256 PCDHB6Q9Y5E3 794 aa5.16□□□□□ -1.58
SCFD1-218ENST00000556256 SETD1BQ9UPS6 1966 aaKnown RBP5.16□□□□□ -1.58
SCFD1-218ENST00000556256 MARCH11A6NNE9 402 aa5.15□□□□□ -1.59
SCFD1-218ENST00000556256 ABCG1P45844 678 aa5.15□□□□□ -1.59
SCFD1-218ENST00000556256 RANGAP1P46060 587 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-218ENST00000556256 DDB1Q16531 1140 aa5.15□□□□□ -1.59
SCFD1-218ENST00000556256 FAM102AQ5T9C2 384 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-218ENST00000556256 ZNF384Q8TF68 577 aa5.15□□□□□ -1.59
SCFD1-218ENST00000556256 SMG7Q92540 1137 aaKnown RBP5.15□□□□□ -1.59
SCFD1-218ENST00000556256 DEPDC7Q96QD5 511 aa5.15□□□□□ -1.59
SCFD1-218ENST00000556256 NCOA5Q9HCD5 579 aaKnown RBP5.15□□□□□ -1.59
SCFD1-218ENST00000556256 KIAA1586Q9HCI6 787 aa5.15□□□□□ -1.59
SCFD1-218ENST00000556256 RNF181Q9P0P0 153 aa5.15□□□□□ -1.59
SCFD1-218ENST00000556256 B4GALT6Q9UBX8 382 aa5.15□□□□□ -1.59
SCFD1-218ENST00000556256 SPO11Q9Y5K1 396 aa5.15□□□□□ -1.59
SCFD1-218ENST00000556256 FPGT-TNNI3KV9GXZ4 949 aa5.15□□□□□ -1.59
SCFD1-218ENST00000556256 ELL2O00472 640 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-218ENST00000556256 C1QL1O75973 258 aa5.14□□□□□ -1.59
SCFD1-218ENST00000556256 SPATA31D3P0C874 917 aa5.14□□□□□ -1.59
SCFD1-218ENST00000556256 RBP3P10745 1247 aa5.14□□□□□ -1.59
SCFD1-218ENST00000556256 ITGAMP11215 1152 aa5.14□□□□□ -1.59
SCFD1-218ENST00000556256 IGFALSP35858 605 aa5.14□□□□□ -1.59
SCFD1-218ENST00000556256 ZNF169Q14929 603 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-218ENST00000556256 METRNLQ641Q3 311 aa5.14□□□□□ -1.59
SCFD1-218ENST00000556256 EFCAB12Q6NXP0 572 aa5.14□□□□□ -1.59
SCFD1-218ENST00000556256 SPATA31D4Q6ZUB0 917 aa5.14□□□□□ -1.59
SCFD1-218ENST00000556256 SLC29A3Q9BZD2 475 aa5.14□□□□□ -1.59
SCFD1-218ENST00000556256 TOMM22Q9NS69 142 aa5.14□□□□□ -1.59
SCFD1-218ENST00000556256 SEMA4GQ9NTN9 838 aa5.14□□□□□ -1.59
SCFD1-218ENST00000556256 POGKQ9P215 609 aa5.14□□□□□ -1.59
SCFD1-218ENST00000556256 USP15Q9Y4E8 981 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-218ENST00000556256 ZMYM3Q14202 1370 aa5.14□□□□□ -1.59
SCFD1-218ENST00000556256 LRRC3CA6NJW4 275 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 TBKBP1A7MCY6 615 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 SEC24DO94855 1032 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-218ENST00000556256 RAPGEF3O95398 923 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 CLEC2LP0C7M8 214 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 CTGFP29279 349 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 SIM1P81133 766 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms